RNA id: TCONS_00024189



Basic Information


Item Value
RNA id TCONS_00024189
length 117
RNA type rRNA
GC content 0.48
exon number 1
gene id XLOC_012281
representative True

Chromosome Information


Item Value
chromosome id NC_007128.7
NCBI id CM002901.2
chromosome length 53461100
location 39149567 ~ 39149683 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


tgccacagccatatcacactgtaGCCCAAGACCAACTTCTCACTGAAGCTATGCAGGGCTGAtactggtcagtatctggatgggagaccacatgggaaaactagtttGCTGTtgaaa

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000177582

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00024183 lncRNA downstream 388910 38754734 ~ 38760657 (-) False XLOC_012277
TCONS_00024958 lncRNA downstream 434632 38712626 ~ 38714935 (-) True XLOC_012276
TCONS_00024957 lncRNA downstream 1122956 38023143 ~ 38026611 (-) True XLOC_012273
TCONS_00024956 lncRNA downstream 1123641 38023143 ~ 38025926 (-) False XLOC_012273
TCONS_00024955 lncRNA downstream 1378227 37768641 ~ 37771340 (-) True XLOC_012271
TCONS_00024959 lncRNA upstream 350889 39500572 ~ 39547487 (-) True XLOC_012282
TCONS_00024960 lncRNA upstream 715198 39864881 ~ 39866039 (-) True XLOC_012289
TCONS_00024961 lncRNA upstream 859693 40009376 ~ 40022224 (-) False XLOC_012291
TCONS_00024962 lncRNA upstream 871793 40021476 ~ 40022214 (-) False XLOC_012291
TCONS_00024198 lncRNA upstream 871793 40021476 ~ 40022249 (-) True XLOC_012291
TCONS_00024186 mRNA downstream 262143 38784362 ~ 38887424 (-) True XLOC_012278
TCONS_00024185 mRNA downstream 370666 38760632 ~ 38778901 (-) True XLOC_012277
TCONS_00024184 mRNA downstream 370678 38756716 ~ 38778889 (-) False XLOC_012277
TCONS_00024181 mRNA downstream 370741 38738840 ~ 38778826 (-) False XLOC_012277
TCONS_00024192 mRNA upstream 610462 39760145 ~ 39761086 (-) True XLOC_012285
TCONS_00024193 mRNA upstream 618997 39768680 ~ 39772999 (-) True XLOC_012286
TCONS_00024194 mRNA upstream 626613 39776296 ~ 39779906 (-) True XLOC_012287
TCONS_00024195 mRNA upstream 633585 39783268 ~ 39786222 (-) True XLOC_012288
TCONS_00024196 mRNA upstream 723901 39873584 ~ 39880725 (-) False XLOC_012290
TCONS_00024188 other downstream 162152 38987296 ~ 38987415 (-) True XLOC_012280
TCONS_00024174 other downstream 1759450 37390003 ~ 37390117 (-) True XLOC_012269
TCONS_00024169 other downstream 1837757 37310662 ~ 37311810 (-) False XLOC_012266
TCONS_00024168 other downstream 1840121 37309329 ~ 37309446 (-) True XLOC_012265
TCONS_00024159 other downstream 2199012 36950438 ~ 36950555 (-) True XLOC_012260
TCONS_00024190 other upstream 382132 39531815 ~ 39531929 (-) True XLOC_012283
TCONS_00024191 other upstream 491998 39641681 ~ 39641798 (-) True XLOC_012284
TCONS_00024224 other upstream 3675608 42825291 ~ 42842863 (-) True XLOC_012313
TCONS_00024257 other upstream 4701079 43850762 ~ 43863624 (-) True XLOC_012331
TCONS_00024261 other upstream 4909128 44058811 ~ 44058927 (-) True XLOC_012333