RNA id: TU115476


Basic Information

Item Value
RNA id TU115476
length 250
lncRNA type intronic
GC content 0.41
exon number 3
gene id G103107
representative False

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 94820001 ~ 94840803 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

gaatatactagagtaatgagagagagagagagagtggaatgtaccagagtaatgagagagagagagagagaggaatataccagagtaatgagagagagagaggaatgtactagagtaatgagagagagaggaatatactagagtaatgagagggagagaggaatgtaccagagtaatgagagagagagaggaatgtactagagtaatgagagagagagaggaatgtactagagtaatgagagagagagag

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU115461 lncRNA upstream 34319 94785241 ~ 94785682 (+) True G103098
TU115426 lncRNA upstream 78745 94738040 ~ 94741256 (+) True G103076
TU115419 lncRNA upstream 93325 94726412 ~ 94726676 (+) True G103070
TU115413 lncRNA upstream 107080 94712348 ~ 94712921 (+) True G103064
TU115407 lncRNA upstream 163021 94656217 ~ 94656980 (+) True G103060
TU115488 lncRNA downstream 1743 94841202 ~ 94843634 (+) True G103111
TU115505 lncRNA downstream 36504 94875963 ~ 94879010 (+) True G103120
TU115531 lncRNA downstream 103984 94943443 ~ 94943761 (+) True G103142
TU115540 lncRNA downstream 142976 94982435 ~ 94982878 (+) True G103151
TU115547 lncRNA downstream 170184 95009643 ~ 95010308 (+) True G103156
XM_036989163.1 mRNA upstream 104329 94642693 ~ 94715672 (+) False LOC110499554
XR_005053418.1 mRNA downstream 261536 95100995 ~ 95101738 (+) True LOC118966140
XM_036989216.1 mRNA downstream 635320 95474779 ~ 95478784 (+) True LOC118966142
XM_036990109.1 mRNA downstream 646219 95485678 ~ 95619013 (+) True LOC110516878
TU115442 other upstream 53444 94766174 ~ 94766557 (+) True G103091
TU115224 other upstream 263812 94555064 ~ 94556189 (+) False G102936
TU116143 other downstream 639330 95478789 ~ 95480329 (+) True G103584
TU116174 other downstream 724880 95564339 ~ 95565530 (+) True G103605
TU116208 other downstream 852528 95691987 ~ 95694076 (+) True G103633

Expression Profile