RNA id: TU115484


Basic Information

Item Value
RNA id TU115484
length 327
lncRNA type intronic
GC content 0.46
exon number 4
gene id G103111
representative False

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 94830819 ~ 94843846 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

gagagagagagagagagagtggaatgtactagagtaatgagagagagagtggaatatactagagtaatgagagagagagaggaatatactagagtaatgagagagagtggaatatactagagtaatgagagagagagagaggaatatactagagtaatgagagagagagagagagaggaatgtactagagtaatgagagagagagagtggaatatactagagtaatgagagagagagagagagagaggaatagagaggaatgtactagagtaatgagagagagagagagagagagagagagagaggaatgtactagagtaatgagag

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU115472 lncRNA upstream 7413 94820762 ~ 94823406 (+) False G103107
TU115461 lncRNA upstream 45137 94785241 ~ 94785682 (+) True G103098
TU115426 lncRNA upstream 89563 94738040 ~ 94741256 (+) True G103076
TU115419 lncRNA upstream 104143 94726412 ~ 94726676 (+) True G103070
TU115413 lncRNA upstream 117898 94712348 ~ 94712921 (+) True G103064
TU115505 lncRNA downstream 32998 94875963 ~ 94879010 (+) True G103120
TU115531 lncRNA downstream 100478 94943443 ~ 94943761 (+) True G103142
TU115540 lncRNA downstream 139470 94982435 ~ 94982878 (+) True G103151
TU115547 lncRNA downstream 166678 95009643 ~ 95010308 (+) True G103156
TU115559 lncRNA downstream 194495 95037460 ~ 95038161 (+) True G103164
XM_036989163.1 mRNA upstream 115147 94642693 ~ 94715672 (+) False LOC110499554
XR_005053418.1 mRNA downstream 258030 95100995 ~ 95101738 (+) True LOC118966140
XM_036989216.1 mRNA downstream 631814 95474779 ~ 95478784 (+) True LOC118966142
XM_036990109.1 mRNA downstream 642713 95485678 ~ 95619013 (+) True LOC110516878
TU115442 other upstream 64262 94766174 ~ 94766557 (+) True G103091
TU115224 other upstream 274630 94555064 ~ 94556189 (+) False G102936
TU116143 other downstream 635824 95478789 ~ 95480329 (+) True G103584
TU116174 other downstream 721374 95564339 ~ 95565530 (+) True G103605
TU116208 other downstream 849022 95691987 ~ 95694076 (+) True G103633

Expression Profile