RNA id: TU145598



Basic Information


Item Value
RNA id TU145598
length 256
lncRNA type inter_gene
GC content 0.42
exon number 1
gene id G126093
representative True

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 25618416 ~ 25618671 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


agaagtagaagaagaagaagaagaagaagaagaagtagaagaagaagaagaagaagaagaagaagaagaagaagtagaagaagaagaagaagaagaagaagaagtagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagtagaagaagaagaagaagaagaagaagaagtagaagaagaagaagaagaagaagaagaagaagaagtagaagaagtagaagaagaagaagaa

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU145594 lncRNA downstream 13295 25604920 ~ 25605121 (-) True G126091
TU145264 lncRNA downstream 106261 25511922 ~ 25512155 (-) True G125785
TU145262 lncRNA downstream 106975 25511122 ~ 25511441 (-) True G125783
TU145260 lncRNA downstream 107379 25510831 ~ 25511037 (-) True G125781
TU145256 lncRNA downstream 112973 25505086 ~ 25505443 (-) True G125777
TU145601 lncRNA upstream 3816 25622487 ~ 25622790 (-) True G126096
TU145604 lncRNA upstream 10287 25628958 ~ 25629159 (-) True G126099
TU145665 lncRNA upstream 120429 25739100 ~ 25739724 (-) True G126159
TU145667 lncRNA upstream 125139 25743810 ~ 25847250 (-) True G126161
TU145704 lncRNA upstream 207310 25825981 ~ 25827529 (-) True G126198
XM_021626064.2 mRNA downstream 157534 25459554 ~ 25460882 (-) True si:ch211-198c19.1
XM_036943470.1 mRNA downstream 174900 25434299 ~ 25443516 (-) True LOC110539072
XR_005035994.1 mRNA downstream 177254 25428983 ~ 25441162 (-) False LOC110539072
XM_036943544.1 mRNA upstream 50355 25669026 ~ 25790258 (-) False LOC110539098
XM_036943516.1 mRNA upstream 50355 25669026 ~ 25790259 (-) False LOC110539098
XM_036943525.1 mRNA upstream 50355 25669026 ~ 25790259 (-) False LOC110539098
XM_036943534.1 mRNA upstream 50355 25669026 ~ 25790259 (-) False LOC110539098
XM_036943551.1 mRNA upstream 50355 25669026 ~ 25790259 (-) False LOC110539098
TU144748 other downstream 841789 24775220 ~ 24776627 (-) True G125305
TU144590 other downstream 1083887 24531662 ~ 24534529 (-) True LOC110538887
TU144456 other downstream 1293580 24324580 ~ 24324836 (-) True G125043
TU144410 other downstream 1348280 24269226 ~ 24270136 (-) True G125003
TU144265 other downstream 1456973 24159167 ~ 24161443 (-) True LOC110538705
TU146650 other upstream 942943 26561614 ~ 26562127 (-) True G127083
TU146643 other upstream 1032705 26651376 ~ 26663014 (-) True LOC110539285
TU147564 other upstream 1652589 27271260 ~ 27278124 (-) True LOC110485245
TU149009 other upstream 2147486 27766157 ~ 27766532 (-) True G129250
TU149117 other upstream 2478011 28096682 ~ 28149986 (-) True LOC110485663

Expression Profile