Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU258767 |
| length | 276 |
| lncRNA type | intronic |
| GC content | 0.35 |
| exon number | 1 |
| gene id | G226222 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 13216875 ~ 13217150 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU258766 | lncRNA | downstream | 119 | 13215875 ~ 13216756 (-) | True | G226221 |
| TU258759 | lncRNA | downstream | 9061 | 13206072 ~ 13207814 (-) | True | G226214 |
| TU258760 | lncRNA | downstream | 11743 | 13203344 ~ 13205132 (-) | True | G226215 |
| TU258755 | lncRNA | downstream | 22204 | 13190920 ~ 13194671 (-) | True | G226210 |
| TU258754 | lncRNA | downstream | 27715 | 13188789 ~ 13189160 (-) | True | G226209 |
| TU258746 | lncRNA | upstream | 507 | 13217657 ~ 13217863 (-) | True | G226201 |
| TU258745 | lncRNA | upstream | 1052 | 13218202 ~ 13221973 (-) | True | G226200 |
| TU258768 | lncRNA | upstream | 6124 | 13223274 ~ 13223678 (-) | True | G226223 |
| TU258770 | lncRNA | upstream | 7892 | 13225042 ~ 13225341 (-) | True | G226225 |
| TU258771 | lncRNA | upstream | 9211 | 13226361 ~ 13226571 (-) | True | G226226 |
| XM_021581457.2 | mRNA | downstream | 287811 | 12925454 ~ 12929064 (-) | False | cxcr3.1 |
| NM_001124423.1 | mRNA | downstream | 287874 | 12925622 ~ 12929001 (-) | True | cxcr3.1 |
| LOC110503616 | mRNA | downstream | 333859 | 12880885 ~ 12883016 (-) | True | LOC110503616 |
| XM_021591169.2 | mRNA | downstream | 341187 | 12864942 ~ 12875688 (-) | True | tlr21 |
| XM_021591157.2 | mRNA | downstream | 356286 | 12856694 ~ 12860589 (-) | True | LOC110509927 |
| XM_021591500.2 | mRNA | upstream | 122043 | 13339193 ~ 13341845 (-) | False | LOC110510146 |
| XM_021591509.2 | mRNA | upstream | 122635 | 13339785 ~ 13341845 (-) | True | LOC110510146 |
| XM_036969665.1 | mRNA | upstream | 128959 | 13346109 ~ 13347872 (-) | True | LOC110510138 |
| LOC110503661 | mRNA | upstream | 142732 | 13359882 ~ 13360962 (-) | True | LOC110503661 |
| XM_021591465.2 | mRNA | upstream | 159705 | 13376855 ~ 13378759 (-) | True | LOC110510120 |
| TU258728 | other | downstream | 36603 | 13177178 ~ 13180272 (-) | True | G226187 |
| TU258665 | other | downstream | 149518 | 13066873 ~ 13067357 (-) | True | G226124 |
| TU257501 | other | downstream | 743815 | 12472299 ~ 12473060 (-) | True | G225171 |
| TU257449 | other | downstream | 759084 | 12454388 ~ 12457791 (-) | True | G225127 |
| TU257419 | other | downstream | 875909 | 12336241 ~ 12340966 (-) | True | G225099 |
| TU258769 | other | upstream | 6734 | 13223884 ~ 13224515 (-) | True | G226224 |
| TU258842 | other | upstream | 126924 | 13344074 ~ 13344375 (-) | True | G226294 |
| TU259125 | other | upstream | 709524 | 13926674 ~ 13927833 (-) | True | wu:fe05a04 |
| TU259117 | other | upstream | 782586 | 13999736 ~ 14001808 (-) | True | LOC110538195 |
| TU259726 | other | upstream | 1211643 | 14428793 ~ 14475166 (-) | True | G227060 |
