Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU309591 |
| length | 232 |
| lncRNA type | intronic |
| GC content | 0.36 |
| exon number | 1 |
| gene id | G272673 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 53189036 ~ 53189267 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU309590 | lncRNA | downstream | 591 | 53188231 ~ 53188445 (-) | True | G272672 |
| TU309583 | lncRNA | downstream | 8291 | 53180431 ~ 53180745 (-) | True | G272665 |
| TU309578 | lncRNA | downstream | 14434 | 53174280 ~ 53174602 (-) | True | G272660 |
| TU309535 | lncRNA | downstream | 70808 | 53117745 ~ 53118228 (-) | True | G272618 |
| TU309530 | lncRNA | downstream | 73735 | 53114968 ~ 53115301 (-) | True | G272613 |
| TU309577 | lncRNA | upstream | 29586 | 53218853 ~ 53219510 (-) | True | G272659 |
| TU309663 | lncRNA | upstream | 82286 | 53271553 ~ 53324337 (-) | True | G272729 |
| TU309679 | lncRNA | upstream | 99076 | 53288343 ~ 53291080 (-) | True | G272741 |
| TU309717 | lncRNA | upstream | 147413 | 53336680 ~ 53337670 (-) | False | G272774 |
| TU309713 | lncRNA | upstream | 147438 | 53336705 ~ 53337562 (-) | False | G272774 |
| XM_021597322.2 | mRNA | downstream | 313266 | 52827783 ~ 52875770 (-) | False | zeb2a |
| XM_036974563.1 | mRNA | downstream | 313266 | 52827783 ~ 52875770 (-) | True | zeb2a |
| XM_021597320.2 | mRNA | downstream | 313267 | 52827783 ~ 52875769 (-) | False | zeb2a |
| XM_021597321.2 | mRNA | downstream | 314116 | 52827783 ~ 52874920 (-) | False | zeb2a |
| XM_021597323.2 | mRNA | downstream | 344622 | 52827783 ~ 52844414 (-) | False | zeb2a |
| XM_021597342.2 | mRNA | upstream | 195274 | 53384541 ~ 53394318 (-) | True | LOC110520193 |
| XM_021597344.2 | mRNA | upstream | 348410 | 53537677 ~ 53562438 (-) | True | LOC110520195 |
| NM_001160552.1 | mRNA | upstream | 471833 | 53661100 ~ 53663978 (-) | True | ubxd2 |
| XM_036974578.1 | mRNA | upstream | 482498 | 53671765 ~ 53746869 (-) | True | LOC110520198 |
| XM_021597349.2 | mRNA | upstream | 627844 | 53817111 ~ 53864985 (-) | True | rab3gap1 |
| TU309282 | other | downstream | 480220 | 52708183 ~ 52708816 (-) | True | LOC110520182 |
| TU307459 | other | downstream | 1588806 | 51597935 ~ 51600230 (-) | True | il1rl1 |
| TU307458 | other | downstream | 1589138 | 51597399 ~ 51599898 (-) | False | il1rl1 |
| TU307414 | other | downstream | 1714897 | 51473324 ~ 51474139 (-) | True | fgf9 |
| TU306786 | other | downstream | 2059726 | 51128440 ~ 51129310 (-) | True | LOC110520160 |
| TU309646 | other | upstream | 60659 | 53249926 ~ 53251084 (-) | True | G272713 |
| TU311493 | other | upstream | 1490651 | 54679918 ~ 54682805 (-) | True | G274344 |
| TU312299 | other | upstream | 1914227 | 55103494 ~ 55119212 (-) | True | LOC110520227 |
| TU312498 | other | upstream | 2220876 | 55410143 ~ 55411487 (-) | False | G275250 |
| TU312500 | other | upstream | 2220876 | 55410143 ~ 55411487 (-) | True | G275250 |
