RNA id: TCONS_00029580


Basic Information

Item Value
RNA id TCONS_00029580
length 117
RNA type rRNA
GC content 0.49
exon number 1
gene id XLOC_015013
representative True

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 42678364 ~ 42678480 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

TGTCACAGCTATATCACTCttcagcccaagaccggttactcactgaagctaagcagggctgaacctggtcagtacctggatgggaaaccacatggaaaagctaggttgctattggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000182613

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00029577 lncRNA downstream 80547 42592200 ~ 42597817 (-) True XLOC_015010
TCONS_00029570 lncRNA downstream 111819 42560842 ~ 42566545 (-) True XLOC_015007
TCONS_00029567 lncRNA downstream 123255 42554421 ~ 42555109 (-) True XLOC_015006
TCONS_00029561 lncRNA downstream 127065 42548653 ~ 42551299 (-) True XLOC_015005
TCONS_00029797 lncRNA downstream 153455 42518577 ~ 42524909 (-) True XLOC_015004
TCONS_00030337 lncRNA upstream 7426 42685906 ~ 42688192 (-) True XLOC_015014
TCONS_00029581 lncRNA upstream 164629 42843109 ~ 42844172 (-) False XLOC_015015
TCONS_00030338 lncRNA upstream 164629 42843109 ~ 42845206 (-) True XLOC_015015
TCONS_00029583 lncRNA upstream 242689 42921169 ~ 42924745 (-) True XLOC_015016
TCONS_00029585 lncRNA upstream 283615 42962095 ~ 42983687 (-) True XLOC_015018
TCONS_00029579 mRNA downstream 26749 42629535 ~ 42651615 (-) True XLOC_015012
TCONS_00029576 mRNA downstream 70913 42591150 ~ 42607451 (-) False XLOC_015010
TCONS_00029575 mRNA downstream 89854 42573724 ~ 42588510 (-) True XLOC_015009
TCONS_00029571 mRNA downstream 105067 42567539 ~ 42573297 (-) False XLOC_015008
TCONS_00029582 mRNA upstream 240799 42919279 ~ 42928979 (-) False XLOC_015016
TCONS_00029584 mRNA upstream 260274 42938754 ~ 42945965 (-) True XLOC_015017
TCONS_00029586 mRNA upstream 318488 42996968 ~ 43004356 (-) True XLOC_015019
TCONS_00029588 mRNA upstream 535047 43213527 ~ 43226124 (-) True XLOC_015021
TCONS_00029590 mRNA upstream 838569 43517049 ~ 43542568 (-) True XLOC_015024
TCONS_00029578 other downstream 82980 42595268 ~ 42595384 (-) True XLOC_015011
TCONS_00029546 other downstream 505136 42173114 ~ 42173228 (-) True XLOC_014994
TCONS_00029535 other downstream 1306386 41352822 ~ 41371978 (-) False XLOC_014985
TCONS_00029522 other downstream 1897093 40781168 ~ 40781271 (-) True XLOC_014978
TCONS_00029518 other downstream 2041673 40636572 ~ 40636691 (-) True XLOC_014976
TCONS_00029587 other upstream 350902 43029382 ~ 43030888 (-) True XLOC_015020
TCONS_00029605 other upstream 1371167 44049647 ~ 44062549 (-) False XLOC_015032
TCONS_00029608 other upstream 1380512 44058992 ~ 44062532 (-) False XLOC_015032
TCONS_00029620 other upstream 3276599 45955079 ~ 45960183 (-) True XLOC_015039
TCONS_00029625 other upstream 3341397 46019877 ~ 46022879 (-) False XLOC_015042