Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU432692 |
| length | 1135 |
| lncRNA type | sense_over |
| GC content | 0.45 |
| exon number | 3 |
| gene id | LOC110523465 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 23767622 ~ 23804521 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0008654 | phospholipid biosynthetic process | biological_process |
| GO:0004609 | phosphatidylserine decarboxylase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU432720 | lncRNA | downstream | 41961 | 23756204 ~ 23756469 (-) | True | G380682 |
| TU432718 | lncRNA | downstream | 43944 | 23754199 ~ 23754486 (-) | True | G380680 |
| TU432717 | lncRNA | downstream | 44380 | 23753753 ~ 23754050 (-) | True | G380679 |
| TU432639 | lncRNA | downstream | 62971 | 23729177 ~ 23735459 (-) | True | LOC110523464 |
| TU432214 | lncRNA | downstream | 198425 | 23555190 ~ 23600005 (-) | True | G380223 |
| TU432733 | lncRNA | upstream | 2764 | 23807218 ~ 23808214 (-) | True | LOC110523467 |
| TU432689 | lncRNA | upstream | 29684 | 23834138 ~ 23837011 (-) | False | LOC110523469 |
| TU432690 | lncRNA | upstream | 32834 | 23837288 ~ 23837923 (-) | True | LOC110523469 |
| TU432760 | lncRNA | upstream | 76391 | 23880845 ~ 23881470 (-) | True | G380720 |
| TU432770 | lncRNA | upstream | 99881 | 23904335 ~ 23905984 (-) | True | G380728 |
| XM_036977094.1 | mRNA | downstream | 1844 | 23767622 ~ 23796586 (-) | False | LOC110523465 |
| XM_036977093.1 | mRNA | downstream | 1863 | 23767622 ~ 23796567 (-) | False | LOC110523465 |
| XM_021602165.2 | mRNA | downstream | 9999 | 23767622 ~ 23788431 (-) | False | LOC110523465 |
| XM_021602167.2 | mRNA | downstream | 10002 | 23767622 ~ 23788428 (-) | False | LOC110523465 |
| XM_021602169.2 | mRNA | downstream | 10003 | 23767622 ~ 23788427 (-) | False | LOC110523465 |
| XM_021602170.2 | mRNA | upstream | 2583 | 23807037 ~ 23828218 (-) | False | LOC110523467 |
| XM_021602171.2 | mRNA | upstream | 2583 | 23807037 ~ 23828218 (-) | False | LOC110523467 |
| XR_002473451.2 | mRNA | upstream | 29404 | 23833858 ~ 23835798 (-) | False | LOC110523469 |
| XR_005051690.1 | mRNA | upstream | 29404 | 23833858 ~ 23835801 (-) | False | LOC110523469 |
| XR_005051689.1 | mRNA | upstream | 29404 | 23833858 ~ 23844602 (-) | False | LOC110523469 |
| TU432686 | other | downstream | 36623 | 23759039 ~ 23761807 (-) | True | G380648 |
| TU432634 | other | downstream | 86539 | 23709798 ~ 23711891 (-) | True | G380610 |
| TU432173 | other | downstream | 241887 | 23547200 ~ 23556543 (-) | True | LOC110522831 |
| TU431801 | other | downstream | 996179 | 22799700 ~ 22802251 (-) | True | jmy |
| TU431328 | other | downstream | 1619117 | 22177265 ~ 22179313 (-) | True | LOC110523434 |
| TU434637 | other | upstream | 1634567 | 25439021 ~ 25441794 (-) | True | LOC110523492 |
| TU435637 | other | upstream | 2192352 | 25996806 ~ 25998780 (-) | True | G383422 |
| TU437993 | other | upstream | 4204813 | 28009267 ~ 28010077 (-) | True | G385617 |
| TU438176 | other | upstream | 4410089 | 28214543 ~ 28214819 (-) | True | G385769 |
| TU438555 | other | upstream | 4547321 | 28351775 ~ 28354745 (-) | True | G386126 |
