RNA id: TCONS_00032626


Basic Information

Item Value
RNA id TCONS_00032626
length 350
RNA type TR_V_gene
GC content 0.41
exon number 2
gene id XLOC_016600
representative True

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 36273162 ~ 36273643 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

ATGGAGAGATGCTTTTTACTGATTCTGATAACAATACAAGGTGTGTTTGCTGACAGCATTAAAccaaaaggcaaagataaaataatcagaAGCGAAGGAGAGTCTGTGACACTGAGCTGCGAATATGAAACAAGCAGCAATAATGTAATGCTATACTGGTACAGACAATATACTAACAGAGAACCTCAGTTTTTGCTGCGTAAAGGAGCTCGATCAAGGAATGGACTTGATGACATACCAGACCGTCAGTTTGATTCGACTTCATCCCAAACCTCCACTGAACTCACTAATACTGGTGTAAGCCTGTCGGATTCAGCTCTCTATTATTGTGCAATAAGAGTTGGAGCCCA

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-141212-22 No description available

Ensembl:

ensembl_id ENSDART00000164489

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00033881 lncRNA downstream 194524 36076196 ~ 36078638 (-) True XLOC_016555
TCONS_00032580 lncRNA downstream 539410 35728589 ~ 35733752 (-) True XLOC_016553
TCONS_00033880 lncRNA downstream 539935 35728589 ~ 35733227 (-) False XLOC_016553
TCONS_00032579 lncRNA downstream 651295 35615395 ~ 35621867 (-) True XLOC_016552
TCONS_00033381 lncRNA downstream 657075 35615395 ~ 35616087 (-) False XLOC_016552
TCONS_00033382 lncRNA upstream 105596 36379239 ~ 36425603 (-) True XLOC_016619
TCONS_00033882 lncRNA upstream 391127 36664770 ~ 36673919 (-) False XLOC_016631
TCONS_00032659 lncRNA upstream 397609 36671252 ~ 36673918 (-) False XLOC_016631
TCONS_00032660 lncRNA upstream 397662 36671305 ~ 36673918 (-) True XLOC_016631
TCONS_00033883 lncRNA upstream 473535 36747178 ~ 36753894 (-) False XLOC_016633
TCONS_00032581 mRNA downstream 232342 36026183 ~ 36040820 (-) True XLOC_016554
TCONS_00032577 mRNA downstream 706052 35510048 ~ 35567110 (-) False XLOC_016551
TCONS_00032576 mRNA downstream 706187 35509418 ~ 35566975 (-) False XLOC_016551
TCONS_00032575 mRNA downstream 706224 35509418 ~ 35566938 (-) False XLOC_016551
TCONS_00032574 mRNA downstream 1170093 34986201 ~ 35103069 (-) True XLOC_016550
TCONS_00032644 mRNA upstream 73287 36346930 ~ 36350082 (-) True XLOC_016618
TCONS_00032645 mRNA upstream 216462 36490105 ~ 36490570 (-) True XLOC_016620
TCONS_00032646 mRNA upstream 220206 36493849 ~ 36494308 (-) True XLOC_016621
TCONS_00032647 mRNA upstream 222993 36496636 ~ 36497113 (-) True XLOC_016622
TCONS_00032648 mRNA upstream 226243 36499886 ~ 36500347 (-) True XLOC_016623
TCONS_00032625 other downstream 2882 36269807 ~ 36270280 (-) True XLOC_016599
TCONS_00032624 other downstream 6266 36266386 ~ 36266896 (-) True XLOC_016598
TCONS_00032623 other downstream 8306 36264323 ~ 36264856 (-) True XLOC_016597
TCONS_00032622 other downstream 9489 36263197 ~ 36263673 (-) True XLOC_016596
TCONS_00032621 other downstream 11502 36261170 ~ 36261660 (-) True XLOC_016595
TCONS_00032627 other upstream 3342 36276985 ~ 36277780 (-) True XLOC_016601
TCONS_00032628 other upstream 5337 36278980 ~ 36279485 (-) True XLOC_016602
TCONS_00032629 other upstream 19253 36292896 ~ 36293427 (-) True XLOC_016603
TCONS_00032630 other upstream 20177 36293820 ~ 36294338 (-) True XLOC_016604
TCONS_00032631 other upstream 23658 36297301 ~ 36297784 (-) True XLOC_016605