RNA id: TCONS_00032629


Basic Information

Item Value
RNA id TCONS_00032629
length 380
RNA type TR_V_gene
GC content 0.42
exon number 2
gene id XLOC_016603
representative True

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 36292896 ~ 36293427 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

ATGAAGAGGAAAAGGGAACAACACTTGGATATTAACATGAACAGATATCGACTGCTGATTCTTTTGACAGgtgTGTTTGCTGACAGCATTGCACCAAAAAAGGAGGGTAGAAATAAAACCAGAAAAGAAGGAGAGTCTGTGACACTGAGCTGCACATTTAACCGCAGCGATACTGCGATTTCACTTTACTGGTACATGCAGTATCCAAACAGAGAACTTCAGTATTTACTGTATAAAGGTCATCGATCGTCTGAGGAGGGGATTGTAACAGACAGTCGTTATAAATCAACTGTCTCACCTACGTCCACTTCACTCACCATTAACTCTGTGAATCTGTCAGATTCAGCCCTGTATTACTGTGCTCTTAAAAAAGGACCACG

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-141212-32 No description available

Ensembl:

ensembl_id ENSDART00000170399

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00033881 lncRNA downstream 214258 36076196 ~ 36078638 (-) True XLOC_016555
TCONS_00032580 lncRNA downstream 559144 35728589 ~ 35733752 (-) True XLOC_016553
TCONS_00033880 lncRNA downstream 559669 35728589 ~ 35733227 (-) False XLOC_016553
TCONS_00032579 lncRNA downstream 671029 35615395 ~ 35621867 (-) True XLOC_016552
TCONS_00033381 lncRNA downstream 676809 35615395 ~ 35616087 (-) False XLOC_016552
TCONS_00033382 lncRNA upstream 85812 36379239 ~ 36425603 (-) True XLOC_016619
TCONS_00033882 lncRNA upstream 371343 36664770 ~ 36673919 (-) False XLOC_016631
TCONS_00032659 lncRNA upstream 377825 36671252 ~ 36673918 (-) False XLOC_016631
TCONS_00032660 lncRNA upstream 377878 36671305 ~ 36673918 (-) True XLOC_016631
TCONS_00033883 lncRNA upstream 453751 36747178 ~ 36753894 (-) False XLOC_016633
TCONS_00032581 mRNA downstream 252076 36026183 ~ 36040820 (-) True XLOC_016554
TCONS_00032577 mRNA downstream 725786 35510048 ~ 35567110 (-) False XLOC_016551
TCONS_00032576 mRNA downstream 725921 35509418 ~ 35566975 (-) False XLOC_016551
TCONS_00032575 mRNA downstream 725958 35509418 ~ 35566938 (-) False XLOC_016551
TCONS_00032574 mRNA downstream 1189827 34986201 ~ 35103069 (-) True XLOC_016550
TCONS_00032644 mRNA upstream 53503 36346930 ~ 36350082 (-) True XLOC_016618
TCONS_00032645 mRNA upstream 196678 36490105 ~ 36490570 (-) True XLOC_016620
TCONS_00032646 mRNA upstream 200422 36493849 ~ 36494308 (-) True XLOC_016621
TCONS_00032647 mRNA upstream 203209 36496636 ~ 36497113 (-) True XLOC_016622
TCONS_00032648 mRNA upstream 206459 36499886 ~ 36500347 (-) True XLOC_016623
TCONS_00032628 other downstream 13411 36278980 ~ 36279485 (-) True XLOC_016602
TCONS_00032627 other downstream 15116 36276985 ~ 36277780 (-) True XLOC_016601
TCONS_00032626 other downstream 19253 36273162 ~ 36273643 (-) True XLOC_016600
TCONS_00032625 other downstream 22616 36269807 ~ 36270280 (-) True XLOC_016599
TCONS_00032624 other downstream 26000 36266386 ~ 36266896 (-) True XLOC_016598
TCONS_00032630 other upstream 393 36293820 ~ 36294338 (-) True XLOC_016604
TCONS_00032631 other upstream 3874 36297301 ~ 36297784 (-) True XLOC_016605
TCONS_00032632 other upstream 8852 36302279 ~ 36302732 (-) True XLOC_016606
TCONS_00032633 other upstream 9966 36303393 ~ 36303842 (-) True XLOC_016607
TCONS_00032634 other upstream 11176 36304603 ~ 36305064 (-) True XLOC_016608

Expression Profile

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