RNA id: TCONS_00032718


Basic Information

Item Value
RNA id TCONS_00032718
length 2873
RNA type mRNA
GC content 0.45
exon number 5
gene id XLOC_016665
representative True

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 37866880 ~ 37874647 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

GGTGTAGTGTATGACCACAGGACAAAACTGCCAGGAAAATGCGGTAGGCAAGTTGTCATAACTAAAAGAGAAATTAAAACACGGCGCATCCACAGTGCCATCTTTatgactttaaaataaatgtggcTTATGGTTGTACGGCCCAAGGGCTCTGTGACGGAAGTAATCGGGCTAGCTGATCAGTCATCGATCGACCGCTATTAGAGCTCTGAGCGCGGGGAGACATGGGGACTAGATCCAGCCGTTTACACGAGGAGGCTGCCTCCCCATCTTTTGATAAAGACGGCATCAAGAGAGAGTCCTGTCGACGGATCCGGAGCACCAGGCCCACCAGCCTCATGGTGGAGTTCTCCGGGAGTTTCGACCACGACTCTGAGACGAACCGCAGCCGGTCAGAAGAGGGCAGCGACTCGGATACCGGGCAGCAGGCGAGCAGCGACGGCAGCCCTGCCGACCGCCACACGTCCCCGTCTCTCAGCAGCGAGGCCTCGCCATCGGATGAGAATGGAGCCGACGAGAAACGCGAGGATGACGGCAGTCCTGGAGGCCCTGTGAGCGAGGAGGAAATAGGCCGTGCACCGCAGCGCACTTTCTCCGAACGTTTGCCTGGTGGTCGCCATTCCTCCGCCAGCGGAGTCACTGCAAGGTCTGCCCGGGTGAGAGGAACTCACGCACGGCCAGTGTCCGAGGCGTGGATCGGCCTCTACAGAGTCAACAACCGGCACGGTGCTATTCGTTGTCCTTTTTGCACCAAGCCGTTCCCTGGAGGGCGGATTGAGGACCACCTTTTAAGTTGTCTGACTTCTCCCCCTCTTCCTTATAACACGGATGTGCTGGCTAAGGACAGTGGAGAGTGTTCAATCTGTCTTGAAGACCTGCTACAAGGAGAAACCATCGCTCGACTGGCCTGCCTGTGTGTCTACCATAAGAGTTGCATTGACACATGGAGCAAAGTGAAGCCGTGCTGCCCTGAGCATCCTTTTGATTGATTCATGTGACTGCGTGCAATGACACTGACTCAGGAGACAATACCCCCTGGCAGGAGGATTTATTTTCTGACGAGAGGATTGTGAGAAAGACACAAAGGAACACAAACTAAAAACAAGCATCAACACTTGTGGTCTGACTAATCGCTCGGGAGTGAGCCTGGCTTTAGCAATCTGACGTGACTCTTGAGACTTGGCTTTTCTCTGCTCTCCACATCTGCGTGAACGGCGGGTTTGCTCTGCTTGCCTTTCCTCTTTGCTTCAAACCTCAGAGTGAAACTGAATATAACTTCGAAAAAGACGGAGAGAAAAGTTACACACGGAACGTTTCGTGGGAATGGTGTTTGGAAATGTGGCGATCTGTCATTTATGCCGGGCTTAGTTTGAGCAGCCTGCTGGGGTTGCATTGGTTTGAATGAACTACTTGATCCGTGATGAGTTGTACATGCGTAAATATTGCACAGGATTACATACGAGGCATGATGTTTTCTatatatcgaatgatatgaaactgTTCTTggggatagtttttttttttttgtcgtttctTTAGGAACATTTCAAAGGCAGAGTAAAATTTTCCAGATTTAGTAGATTTGTAGTGATTTTATCCATCATCAAGTCGAAAGTCTCTCTCAATACCACATCAAGCTCTTTTTATTCTCTTGATCAAATTGAACTGTATATCATTGACAGATCGGAGTGAAACTTCCACTAGTTAGCTTAATGGATGTGTTCTTGGTtgcagtgaagtgtgtgtgtgttcaagtgtGTACTCAAATGCAGATGATGGTGACCTGACAGCATTTACTACTCTTGGAGGGCAggttgagatttttttttgttgtgtgtcGGATGTAAGAAAACACTTTACGCTCTACACCAGGCCTTCTCTGCACTGAATGAGACCATCTGTGGTGCTGAGATGTGTGTCAGATGCAGTAATGCCATATGGCACATGCTTCGCCTGAGGATAGAGATTAAGAACAGCTGATGGGTAATTATGACGATGTCATCATCATCGTCCCCCCTAGGAATGAACAATGGAATAAGTGCATCGGAAAGGATTTTTTTTCGACCGCCTTCCACAGAGATGCTTGTTCAatattttgaggttttttttgATGGTGGGTGTGTGTTACTACGTTCATCATTCTATCGTGTCTTGTAACGATCAGTTGGTCTGTTACCTTTTTTGCCTTAGCTCAAGGATTCATATTTTGTGAGCAGTATTGCAATGTATTTTCATTACAGGTCAGTCAAACGGTTCTttcccattgaaaaaaaaaaaccgtGAGAAATGCCAAGAGGTGACGGTCATTTTACAGTAACGTTTTTGTTTAGTGTTGGTGTAGTGCTTTGTGGAGTGGACGGGGGAGGTATTGTCAGAGTATTTTTGACAATCTTTTAAGCTCTGTAAGTTAGCTTTTGCCCTTTAACTTATGTGGTGCCAAACCTCAATATTCATATTTACTATACTAACCTGGGGCTTAGCTAACTCCAAAggtgttttaatattattattattattatatatatacatacacagtatAAATACCATAGAAAGTTCTGTAATTATTCAGTGCTAAGGGTCTTAACCCGCTTCATCCTGTGTGTTGACTAGTTGTCGGACAAATTGGAATGATTTGGGAATGTTCTTTTGGTCAGTAAGATTGGAAAATATTCACATCCCCAAACAGACAATCTGCCTTCATTCTACTAAAGAACaattgagtatttatttattaaagtgtaAATATGTATAACATTTCAAAatggctttgtccttttgtttgtCCATGATGCTGTTTCTATGCCGAAATCTTTTGTATTGTCCgataaattgtttttatatgtattttttacaataaatatgctTAAGTGTGA

Function

GO:

id name namespace
GO:0046872 metal ion binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-040426-1913 Predicted to enable metal ion binding activity.

Ensembl:

ensembl_id ENSDART00000039386

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00033384 lncRNA downstream 51507 37813663 ~ 37815373 (-) True XLOC_016662
TCONS_00033385 lncRNA downstream 51576 37813663 ~ 37815304 (-) False XLOC_016662
TCONS_00032709 lncRNA downstream 81720 37782254 ~ 37785160 (-) False XLOC_016661
TCONS_00032707 lncRNA downstream 178568 37687463 ~ 37688312 (-) True XLOC_016660
TCONS_00032702 lncRNA downstream 288899 37569667 ~ 37577981 (-) True XLOC_016658
TCONS_00032737 lncRNA upstream 263703 38138350 ~ 38141977 (-) True XLOC_016679
TCONS_00033891 lncRNA upstream 269515 38144162 ~ 38145701 (-) True XLOC_016680
TCONS_00033892 lncRNA upstream 318312 38192959 ~ 38194479 (-) True XLOC_016681
TCONS_00032745 lncRNA upstream 341698 38216345 ~ 38225373 (-) True XLOC_016682
TCONS_00032760 lncRNA upstream 1123401 38998048 ~ 38998761 (-) False XLOC_016690
TCONS_00032715 mRNA downstream 2215 37851124 ~ 37864665 (-) False XLOC_016664
TCONS_00032717 mRNA downstream 4500 37851506 ~ 37862380 (-) True XLOC_016664
TCONS_00032716 mRNA downstream 8157 37851417 ~ 37858723 (-) False XLOC_016664
TCONS_00032714 mRNA downstream 29408 37833131 ~ 37837472 (-) True XLOC_016663
TCONS_00032713 mRNA downstream 29683 37830852 ~ 37837197 (-) False XLOC_016663
TCONS_00032719 mRNA upstream 5165 37879812 ~ 37883256 (-) True XLOC_016666
TCONS_00032720 mRNA upstream 12630 37887277 ~ 37889152 (-) False XLOC_016667
TCONS_00032721 mRNA upstream 12695 37887342 ~ 37889111 (-) False XLOC_016667
TCONS_00032722 mRNA upstream 12785 37887432 ~ 37888429 (-) True XLOC_016667
TCONS_00032723 mRNA upstream 17959 37892606 ~ 37893910 (-) True XLOC_016668
TCONS_00032691 other downstream 457723 37405351 ~ 37409157 (-) True XLOC_016651
TCONS_00032658 other downstream 1192961 36670656 ~ 36673919 (-) False XLOC_016631
TCONS_00032657 other downstream 1195722 36664770 ~ 36671158 (-) False XLOC_016631
TCONS_00032643 other downstream 1534549 36332018 ~ 36332331 (-) True XLOC_016617
TCONS_00032642 other downstream 1538769 36327607 ~ 36328111 (-) True XLOC_016616
TCONS_00032743 other upstream 329294 38203941 ~ 38204793 (-) False XLOC_016682
TCONS_00032764 other upstream 1188107 39062754 ~ 39068546 (-) False XLOC_016693
TCONS_00032769 other upstream 1496164 39370811 ~ 39370927 (-) True XLOC_016694
TCONS_00032776 other upstream 1860905 39735552 ~ 39752556 (-) True XLOC_016698
TCONS_00032777 other upstream 2052314 39926961 ~ 40026622 (-) False XLOC_016700

Expression Profile

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