RNA id: TCONS_00032736


Basic Information

Item Value
RNA id TCONS_00032736
length 784
RNA type mRNA
GC content 0.52
exon number 4
gene id XLOC_016679
representative False

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 38134924 ~ 38141997 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

TCCCACATGCACACTCCTCCATGCTCACTTTGGCTGtctgtgtgaaaacatcctgctctACCTTGCACAGAAGACTGCAGGACACAACAGCTGCTATGGGCTCCTTAGAGGAACAGCACACGTGCCCCATGTGTCGTGATCTATTTGGTCGAGCTCAGCCCTTCCCCTGTGGCCACAGCTTTTGCCCAACCTGTGCACAAGAGGCCTGGAGTCAGAACGAAGGCTCTGGCAAGCGTAGATTTGTATGCCCACGGTGCCTGGAGGAGCAGGGAATGGTGCTGTGTGACTGTTGTCCAGAAGAAGAAGGCGATGAGGCTCAAGAAGCAGTGAAGACCTGCCTGAATTGTGAGATCTCTCTGTGTGAGCAGCATCTGCTGCCACATCTGCAGCGTCCTGCTTACAGCACTCACCTGTTGGTGGAGCCGCTGATGGAGGTGTCCCGCCGCAGGTGTCCGGCCCATAAGGAGATGTTTCGCTATTACTGCATGGATGATGGGCAGTATGTCTGTGCTGACTGCATCCTGGAAGGACAACACGCTCAACATCAGGTCAAAGGGGTGAGAAAAGTGGAAGAGGAGTATAAAGTAAAATTGCAGAGCCTGTTTGAgaaagcagaagaaaaaataaagcagGGTGAAATGATGCTAAAAGAACATCAGCGCGCTAGTCGAACAATCATTGAGGACTCCTCTGTGAGTGACGTCTCTCAGGTGTTACAGATGGGCTCAGCTCTGCAGGCTCAGGTGGGCCGACTGGTGTCTGCCGTGATAAAAATCACAGAGCA

Function

GO:

id name namespace
GO:0046872 metal ion binding molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-070912-10 Predicted to enable zinc ion binding activity.

Ensembl:

ensembl_id ENSDART00000143469

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00033384 lncRNA downstream 319551 37813663 ~ 37815373 (-) True XLOC_016662
TCONS_00033385 lncRNA downstream 319620 37813663 ~ 37815304 (-) False XLOC_016662
TCONS_00032709 lncRNA downstream 349764 37782254 ~ 37785160 (-) False XLOC_016661
TCONS_00032707 lncRNA downstream 446612 37687463 ~ 37688312 (-) True XLOC_016660
TCONS_00032702 lncRNA downstream 556943 37569667 ~ 37577981 (-) True XLOC_016658
TCONS_00033891 lncRNA upstream 2165 38144162 ~ 38145701 (-) True XLOC_016680
TCONS_00033892 lncRNA upstream 50962 38192959 ~ 38194479 (-) True XLOC_016681
TCONS_00032745 lncRNA upstream 74348 38216345 ~ 38225373 (-) True XLOC_016682
TCONS_00032760 lncRNA upstream 856051 38998048 ~ 38998761 (-) False XLOC_016690
TCONS_00032761 lncRNA upstream 870923 39012920 ~ 39015104 (-) True XLOC_016690
TCONS_00032735 mRNA downstream 3576 38127986 ~ 38131348 (-) True XLOC_016678
TCONS_00032734 mRNA downstream 9267 38121415 ~ 38125657 (-) True XLOC_016677
TCONS_00032732 mRNA downstream 17386 38087413 ~ 38117538 (-) False XLOC_016676
TCONS_00032733 mRNA downstream 20554 38087525 ~ 38114370 (-) True XLOC_016676
TCONS_00032731 mRNA downstream 54849 38068069 ~ 38080075 (-) True XLOC_016675
TCONS_00032738 mRNA upstream 55823 38197820 ~ 38206331 (-) False XLOC_016682
TCONS_00032739 mRNA upstream 55833 38197830 ~ 38206034 (-) False XLOC_016682
TCONS_00032740 mRNA upstream 55856 38197853 ~ 38225472 (-) False XLOC_016682
TCONS_00032741 mRNA upstream 58995 38200992 ~ 38204845 (-) False XLOC_016682
TCONS_00032742 mRNA upstream 59841 38201838 ~ 38206141 (-) False XLOC_016682
TCONS_00032691 other downstream 725767 37405351 ~ 37409157 (-) True XLOC_016651
TCONS_00032658 other downstream 1461005 36670656 ~ 36673919 (-) False XLOC_016631
TCONS_00032657 other downstream 1463766 36664770 ~ 36671158 (-) False XLOC_016631
TCONS_00032643 other downstream 1802593 36332018 ~ 36332331 (-) True XLOC_016617
TCONS_00032642 other downstream 1806813 36327607 ~ 36328111 (-) True XLOC_016616
TCONS_00032743 other upstream 61944 38203941 ~ 38204793 (-) False XLOC_016682
TCONS_00032764 other upstream 920757 39062754 ~ 39068546 (-) False XLOC_016693
TCONS_00032769 other upstream 1228814 39370811 ~ 39370927 (-) True XLOC_016694
TCONS_00032776 other upstream 1593555 39735552 ~ 39752556 (-) True XLOC_016698
TCONS_00032777 other upstream 1784964 39926961 ~ 40026622 (-) False XLOC_016700

Expression Profile

//