Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00032749 |
| length | 1089 |
| RNA type | mRNA |
| GC content | 0.44 |
| exon number | 9 |
| gene id | XLOC_016685 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007113.7 |
| NCBI id | CM002886.2 |
| chromosome length | 59640629 |
| location | 38282647 ~ 38284749 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0035803 | egg coat formation | biological_process |
| GO:0007339 | binding of sperm to zona pellucida | biological_process |
| GO:2000344 | positive regulation of acrosome reaction | biological_process |
| GO:0031012 | extracellular matrix | cellular_component |
| GO:0032190 | acrosin binding | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-030616-590 | Predicted to enable acrosin binding activity. Predicted to be involved in binding activity of sperm to zona pellucida; egg coat formation; and positive regulation of acrosome reaction. Predicted to be active in extracellular matrix. |
| ensembl_id | ENSDART00000148281 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00032745 | lncRNA | downstream | 57274 | 38216345 ~ 38225373 (-) | True | XLOC_016682 |
| TCONS_00033892 | lncRNA | downstream | 88168 | 38192959 ~ 38194479 (-) | True | XLOC_016681 |
| TCONS_00033891 | lncRNA | downstream | 136946 | 38144162 ~ 38145701 (-) | True | XLOC_016680 |
| TCONS_00032737 | lncRNA | downstream | 140670 | 38138350 ~ 38141977 (-) | True | XLOC_016679 |
| TCONS_00033384 | lncRNA | downstream | 467274 | 37813663 ~ 37815373 (-) | True | XLOC_016662 |
| TCONS_00032760 | lncRNA | upstream | 713400 | 38998048 ~ 38998761 (-) | False | XLOC_016690 |
| TCONS_00032761 | lncRNA | upstream | 728272 | 39012920 ~ 39015104 (-) | True | XLOC_016690 |
| TCONS_00032767 | lncRNA | upstream | 797648 | 39082296 ~ 39086574 (-) | False | XLOC_016693 |
| TCONS_00033386 | lncRNA | upstream | 1325673 | 39610321 ~ 39612464 (-) | True | XLOC_016697 |
| TCONS_00032775 | lncRNA | upstream | 1449921 | 39734569 ~ 39737898 (-) | False | XLOC_016698 |
| TCONS_00032748 | mRNA | downstream | 568 | 38277275 ~ 38282079 (-) | True | XLOC_016684 |
| TCONS_00032746 | mRNA | downstream | 21375 | 38231695 ~ 38261272 (-) | False | XLOC_016683 |
| TCONS_00032747 | mRNA | downstream | 26058 | 38254095 ~ 38256589 (-) | True | XLOC_016683 |
| TCONS_00032740 | mRNA | downstream | 57175 | 38197853 ~ 38225472 (-) | False | XLOC_016682 |
| TCONS_00032751 | mRNA | upstream | 766 | 38285414 ~ 38288024 (-) | False | XLOC_016686 |
| TCONS_00032752 | mRNA | upstream | 1364 | 38286012 ~ 38287987 (-) | False | XLOC_016686 |
| TCONS_00032753 | mRNA | upstream | 2710 | 38287358 ~ 38312757 (-) | True | XLOC_016686 |
| TCONS_00032755 | mRNA | upstream | 33352 | 38318000 ~ 38337122 (-) | False | XLOC_016687 |
| TCONS_00032754 | mRNA | upstream | 33352 | 38318000 ~ 38337122 (-) | True | XLOC_016687 |
| TCONS_00032743 | other | downstream | 77854 | 38203941 ~ 38204793 (-) | False | XLOC_016682 |
| TCONS_00032691 | other | downstream | 873490 | 37405351 ~ 37409157 (-) | True | XLOC_016651 |
| TCONS_00032658 | other | downstream | 1608728 | 36670656 ~ 36673919 (-) | False | XLOC_016631 |
| TCONS_00032657 | other | downstream | 1611489 | 36664770 ~ 36671158 (-) | False | XLOC_016631 |
| TCONS_00032643 | other | downstream | 1950316 | 36332018 ~ 36332331 (-) | True | XLOC_016617 |
| TCONS_00032764 | other | upstream | 778106 | 39062754 ~ 39068546 (-) | False | XLOC_016693 |
| TCONS_00032769 | other | upstream | 1086163 | 39370811 ~ 39370927 (-) | True | XLOC_016694 |
| TCONS_00032776 | other | upstream | 1450904 | 39735552 ~ 39752556 (-) | True | XLOC_016698 |
| TCONS_00032777 | other | upstream | 1642313 | 39926961 ~ 40026622 (-) | False | XLOC_016700 |
| TCONS_00032778 | other | upstream | 1724090 | 40008738 ~ 40026622 (-) | True | XLOC_016700 |
