RNA id: TCONS_00034072



Basic Information


Item Value
RNA id TCONS_00034072
length 946
RNA type mRNA
GC content 0.37
exon number 1
gene id XLOC_017062
representative True

Chromosome Information


Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 1088658 ~ 1089603 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


atacaacaacaacaacaacactgctgCATTCACTGAATATACACATCAACtaatccatacatacatccattgATCATCTatctagccatccatccatccttctatccatcaatcatccatccatccatccattcattcattcatccatcaatcaattcatcattcatccatccatccatccatccattcattcatccatcaatcaattcatcattcatccatccatccatccattcattcatttatcaatcaattcatcattcatccatccatccatccatccatccattcattcatccatcaatcaattcatcattcatccatccatccatccattcattcatccatcaatcaattcatcattcatccatccatccatccattcattcatccatcaatcaattcatcattcatccatccatccatccattcattcatccatcaatcaattcatcattcatccatccatccatccattcattcatccatcaatcaattcatcattcatccatccatccatccattcattcatttatcaatcaattcatcattcatccatccatccatccatccatccattcatccatcaatcaattcatcattcatccatccatccatccatccattcattcatccatcaatcaattcatcattcatccatccatccatccattcattcatccatcaatcaattcatcattcatccatccatccatccatccatccatccatccattcattcatccatcaatcaattcatcattcatccatccatccatccatccattcattcatccatcaatcaattcatcattcatccatccatccatccatccattcattcatccatcaatcaattcatcattcatccatccatccatccatccattcattcttctatccatcaatcaatcaatctatcatccatccatccatcctccaatcc

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000162991

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00036534 lncRNA upstream 188278 896905 ~ 900380 (+) True XLOC_017061
TCONS_00034068 lncRNA upstream 331589 753868 ~ 757069 (+) True XLOC_017058
TCONS_00036532 lncRNA upstream 406366 681847 ~ 682292 (+) False XLOC_017056
TCONS_00036535 lncRNA downstream 110689 1200292 ~ 1203603 (+) False XLOC_017065
TCONS_00036536 lncRNA downstream 110689 1200292 ~ 1203802 (+) False XLOC_017065
TCONS_00036537 lncRNA downstream 110689 1200292 ~ 1203874 (+) False XLOC_017065
TCONS_00034075 lncRNA downstream 110763 1200366 ~ 1202182 (+) True XLOC_017065
TCONS_00036538 lncRNA downstream 265060 1354663 ~ 1355683 (+) True XLOC_017070
TCONS_00034071 mRNA upstream 240590 826459 ~ 848068 (+) True XLOC_017060
TCONS_00034069 mRNA upstream 265382 812012 ~ 823276 (+) False XLOC_017059
TCONS_00034070 mRNA upstream 265432 812162 ~ 823226 (+) True XLOC_017059
TCONS_00034064 mRNA upstream 311439 715739 ~ 777219 (+) False XLOC_017058
TCONS_00034073 mRNA downstream 31855 1121458 ~ 1125395 (+) True XLOC_017063
TCONS_00034074 mRNA downstream 106783 1196386 ~ 1199009 (+) True XLOC_017064
TCONS_00034076 mRNA downstream 182923 1272526 ~ 1276175 (+) False XLOC_017066
TCONS_00034077 mRNA downstream 182932 1272535 ~ 1276158 (+) True XLOC_017066
TCONS_00034078 mRNA downstream 188581 1278184 ~ 1287799 (+) True XLOC_017067
TCONS_00034041 other upstream 770553 262995 ~ 318105 (+) False XLOC_017045
TCONS_00034086 other downstream 296146 1385749 ~ 1392655 (+) True XLOC_017071
TCONS_00034116 other downstream 1818948 2908551 ~ 2908665 (+) True XLOC_017093
TCONS_00034146 other downstream 3985321 5074924 ~ 5075054 (+) True XLOC_017116
TCONS_00034147 other downstream 4016965 5106568 ~ 5112043 (+) False XLOC_017117
TCONS_00034151 other downstream 4334359 5423962 ~ 5424096 (+) True XLOC_017119

Expression Profile


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