RNA id: TU762446



Basic Information


Item Value
RNA id TU762446
length 727
lncRNA type intronic
GC content 0.41
exon number 2
gene id G669340
representative True

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 7483634 ~ 7484459 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ctttatttaaccaggtaggctagttgagaacacctttatttaaccaggtaggctagttgagaacacctttatttaaccaggtaggacagttgagaacacctttatttaaccaggtaggctagttgagaacacctttatttaaccaggtaggctagttgggaacacctttatttaaccaggtgggctagttgagaacacctttatttaaccaggtaggctagttgagaacacctttatttaaccaggtaggctagttgggaacacctttatttaaccaggtaggctagttgagaacacctttatttaaccaggtaggctagttgagaacacctttatttaaccaggtaggctagttgggaacacctttatttaaccaggtaggctagttgagaacacctttatttaaccaggtaggctagttgagaacacctttatttaaccaggtaggccagttgagaacacctttatttaaccaggtaggctagttgagaacacctttatttaaccaggtaggctagttgagaacacctttatttaaccaggtaggctagttgggaacacctttatttaaccaggtaggctagttgagaacacctttatttaaccaggtaggctagttgagaacacctttatttaaccaggtaggccagttgagaacacctttatttaaccaggtaggccagttgagaacacctttatttaaccaggtaggctagttgagaacacc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU762445 lncRNA downstream 2446 7480961 ~ 7481188 (-) True G669339
TU762378 lncRNA downstream 59946 7400907 ~ 7423688 (-) False LOC110529302
TU762414 lncRNA downstream 88594 7394225 ~ 7395040 (-) True G669311
TU762410 lncRNA downstream 95471 7387264 ~ 7388163 (-) True G669307
TU762381 lncRNA downstream 128553 7351687 ~ 7355081 (-) True G669285
TU762455 lncRNA upstream 9152 7493611 ~ 7493835 (-) True G669345
TU762456 lncRNA upstream 11134 7495593 ~ 7495875 (-) True G669346
TU762459 lncRNA upstream 15270 7499729 ~ 7500004 (-) True G669349
TU762462 lncRNA upstream 18278 7502737 ~ 7503024 (-) True G669352
TU762469 lncRNA upstream 24969 7509428 ~ 7510880 (-) True G669356
XM_036984651.1 mRNA downstream 3586 7418331 ~ 7480048 (-) True susd6
XM_021611419.2 mRNA downstream 69333 7400907 ~ 7414301 (-) False LOC110529302
XR_005052767.1 mRNA upstream 183288 7667747 ~ 7670221 (-) False LOC118965488
XM_036984653.1 mRNA upstream 186336 7670795 ~ 7689709 (-) True LOC110529176
XR_005052768.1 mRNA upstream 306927 7791386 ~ 7802722 (-) True LOC118965489
XM_021611432.2 mRNA upstream 458686 7943145 ~ 7944881 (-) True LOC110529310
XR_005053014.1 mRNA upstream 461826 7946285 ~ 7947026 (-) False LOC118965603
TU762377 other downstream 65399 7416025 ~ 7418235 (-) True G669281
TU762376 other downstream 69398 7401464 ~ 7414236 (-) True LOC110529302
TU762305 other downstream 148920 7325550 ~ 7334714 (-) False G669229
TU762373 other downstream 163431 7317304 ~ 7320203 (-) True G669278
TU762108 other downstream 492022 6989850 ~ 6991612 (-) True G669087
TU763125 other upstream 623412 8107871 ~ 8110958 (-) True G669918
TU763341 other upstream 856531 8340990 ~ 8342120 (-) True G670097
TU763857 other upstream 1092592 8577051 ~ 8577780 (-) True G670549
TU764088 other upstream 1471634 8956093 ~ 8961731 (-) True G670733
TU764280 other upstream 1779391 9263850 ~ 9265093 (-) True G670905

Expression Profile