Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU927710 |
| length | 643 |
| lncRNA type | intronic |
| GC content | 0.42 |
| exon number | 2 |
| gene id | G815580 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 51015307 ~ 51016781 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU927681 | lncRNA | upstream | 60883 | 50953753 ~ 50954424 (+) | True | G815552 |
| TU927672 | lncRNA | upstream | 69552 | 50945412 ~ 50945755 (+) | True | G815543 |
| TU927665 | lncRNA | upstream | 77090 | 50938008 ~ 50938217 (+) | True | G815536 |
| TU927656 | lncRNA | upstream | 92306 | 50922775 ~ 50923001 (+) | True | G815528 |
| TU927654 | lncRNA | upstream | 94228 | 50920866 ~ 50921079 (+) | True | G815526 |
| TU927742 | lncRNA | downstream | 62775 | 51079556 ~ 51088643 (+) | True | G815611 |
| TU927760 | lncRNA | downstream | 80581 | 51097362 ~ 51097596 (+) | True | G815629 |
| TU927761 | lncRNA | downstream | 80998 | 51097779 ~ 51098009 (+) | True | G815630 |
| TU927774 | lncRNA | downstream | 101319 | 51118100 ~ 51118396 (+) | True | G815643 |
| TU927873 | lncRNA | downstream | 242128 | 51258909 ~ 51264781 (+) | True | G815734 |
| XM_036988244.1 | mRNA | upstream | 457810 | 50445552 ~ 50557497 (+) | False | si:dkey-178k16.1 |
| XM_036988245.1 | mRNA | upstream | 457810 | 50445552 ~ 50557497 (+) | False | si:dkey-178k16.1 |
| XM_036988246.1 | mRNA | upstream | 457810 | 50445552 ~ 50557497 (+) | True | si:dkey-178k16.1 |
| XR_005053279.1 | mRNA | upstream | 459011 | 50445552 ~ 50556296 (+) | False | si:dkey-178k16.1 |
| XR_005053278.1 | mRNA | upstream | 587213 | 50423446 ~ 50428094 (+) | True | LOC118966068 |
| XR_002474819.2 | mRNA | downstream | 27634 | 51044415 ~ 51056932 (+) | False | exosc10 |
| XM_021616098.2 | mRNA | downstream | 27649 | 51044430 ~ 51056932 (+) | True | exosc10 |
| XM_021616099.2 | mRNA | downstream | 44291 | 51061072 ~ 51067904 (+) | True | srm |
| XM_021616100.2 | mRNA | downstream | 89546 | 51106327 ~ 51107746 (+) | True | cort |
| LOC110531197 | mRNA | downstream | 108354 | 51125135 ~ 51127512 (+) | True | LOC110531197 |
| TU927553 | other | upstream | 214926 | 50796214 ~ 50800381 (+) | False | G815428 |
| TU927551 | other | upstream | 214926 | 50796320 ~ 50800381 (+) | True | G815428 |
| TU925067 | other | upstream | 1899689 | 49115137 ~ 49115618 (+) | True | G813139 |
| TU924996 | other | upstream | 2008597 | 49003319 ~ 49006710 (+) | True | G813074 |
| TU924989 | other | upstream | 2055316 | 48959749 ~ 48959991 (+) | True | G813071 |
| TU927741 | other | downstream | 61666 | 51078447 ~ 51078942 (+) | True | G815610 |
| TU927907 | other | downstream | 328591 | 51345372 ~ 51346494 (+) | True | G815767 |
| TU929026 | other | downstream | 1306490 | 52323271 ~ 52325640 (+) | True | LOC110532349 |
| TU929242 | other | downstream | 1709640 | 52726421 ~ 52727520 (+) | True | LOC110532368 |
| TU932380 | other | downstream | 3710090 | 54726871 ~ 54727376 (+) | True | G819897 |
