Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00040201 |
| length | 1364 |
| RNA type | mRNA |
| GC content | 0.40 |
| exon number | 6 |
| gene id | XLOC_020220 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007133.7 |
| NCBI id | CM002906.2 |
| chromosome length | 39133080 |
| location | 10066846 ~ 10071296 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0016020 | membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| id | description |
|---|---|
| ZDB-GENE-050208-567 | Predicted to be located in membrane. Predicted to be integral component of membrane. |
| ensembl_id | ENSDART00000105914 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00042070 | lncRNA | upstream | 17613 | 10018900 ~ 10049233 (+) | True | XLOC_020219 |
| TCONS_00042069 | lncRNA | upstream | 75352 | 9989905 ~ 9991494 (+) | True | XLOC_020216 |
| TCONS_00042068 | lncRNA | upstream | 162223 | 9897971 ~ 9904623 (+) | True | XLOC_020212 |
| TCONS_00042067 | lncRNA | upstream | 162348 | 9886745 ~ 9904498 (+) | True | XLOC_020211 |
| TCONS_00040181 | lncRNA | upstream | 275479 | 9782954 ~ 9791367 (+) | False | XLOC_020205 |
| TCONS_00042071 | lncRNA | downstream | 2124 | 10073420 ~ 10095290 (+) | False | XLOC_020221 |
| TCONS_00042072 | lncRNA | downstream | 3569 | 10074865 ~ 10095290 (+) | False | XLOC_020221 |
| TCONS_00041885 | lncRNA | downstream | 87167 | 10158463 ~ 10164865 (+) | False | XLOC_020223 |
| TCONS_00040213 | lncRNA | downstream | 143698 | 10214994 ~ 10222660 (+) | False | XLOC_020226 |
| TCONS_00042073 | lncRNA | downstream | 145508 | 10216804 ~ 10222660 (+) | True | XLOC_020226 |
| TCONS_00040199 | mRNA | upstream | 52477 | 10010292 ~ 10014369 (+) | True | XLOC_020218 |
| TCONS_00040198 | mRNA | upstream | 59847 | 9994833 ~ 10006999 (+) | True | XLOC_020217 |
| TCONS_00040197 | mRNA | upstream | 63158 | 9994833 ~ 10003688 (+) | False | XLOC_020217 |
| TCONS_00040196 | mRNA | upstream | 82814 | 9981079 ~ 9984032 (+) | True | XLOC_020215 |
| TCONS_00040195 | mRNA | upstream | 121209 | 9939901 ~ 9945637 (+) | True | XLOC_020214 |
| TCONS_00040203 | mRNA | downstream | 19377 | 10090673 ~ 10097227 (+) | False | XLOC_020221 |
| TCONS_00040204 | mRNA | downstream | 19545 | 10090841 ~ 10092702 (+) | True | XLOC_020221 |
| TCONS_00040205 | mRNA | downstream | 58492 | 10129788 ~ 10141469 (+) | True | XLOC_020222 |
| TCONS_00040206 | mRNA | downstream | 87206 | 10158502 ~ 10164533 (+) | False | XLOC_020223 |
| TCONS_00040208 | mRNA | downstream | 88216 | 10159512 ~ 10164401 (+) | False | XLOC_020223 |
| TCONS_00040182 | other | upstream | 277042 | 9787067 ~ 9789804 (+) | True | XLOC_020205 |
| TCONS_00040167 | other | upstream | 683362 | 9359899 ~ 9383484 (+) | True | XLOC_020197 |
| TCONS_00040142 | other | upstream | 1280553 | 8786167 ~ 8786293 (+) | False | XLOC_020180 |
| TCONS_00040140 | other | upstream | 1297453 | 8766367 ~ 8769393 (+) | True | XLOC_020179 |
| TCONS_00040135 | other | upstream | 1367613 | 8695096 ~ 8699233 (+) | False | XLOC_020176 |
| TCONS_00040207 | other | downstream | 87862 | 10159158 ~ 10164164 (+) | False | XLOC_020223 |
| TCONS_00040218 | other | downstream | 422959 | 10494255 ~ 10513982 (+) | True | XLOC_020229 |
| TCONS_00040220 | other | downstream | 482432 | 10553728 ~ 10558972 (+) | True | XLOC_020230 |
| TCONS_00040228 | other | downstream | 601855 | 10673151 ~ 10678490 (+) | False | XLOC_020234 |
| TCONS_00040250 | other | downstream | 1591321 | 11662617 ~ 11674637 (+) | True | XLOC_020251 |
