RNA id: XM_036937959.1


Basic Information

Item Value
RNA id XM_036937959.1
length 1557
RNA type mRNA
GC content 0.53
exon number 8
gene id bcl2l12
representative True

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 60886071 ~ 60893424 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

ATACTAAGACACAAAAAAGTGATGTCTGCTGATGCGCTCAACTCTACCTCTCCCAACCCCTCAGTGATGTCAGCTGATGCGCTCAACCCTACCTCTCCCAACCCCTCAGTGATGTCAACTGATGCGCTCAACCCTATATCTCCCAACCCCTCTGTCTCGTCCATCTCTCTGGTTGAGATCAAGGCAGACACTCGTCTGGTGCTGAAAGCTTTCCTCCGCAGCGCACTCTCTAATCCTTCGACCGAGCGGCTTGGGACGGTGGGGGGAAGCTACAAAGACCACAACAAGTACAGTGCAAAGGAGTCTAGGAAGCGGCCGGACAATGGCTGGGACTCTCTGGATGAAGCAATCAGCTCAGTGGAGGAGAAGAAACACGGCTTGAAGGACCTCATTAAGAGACGACTGCAGCCACGGCCCTCCACCCTGCCCCTCCGTCGCTCAGCTAAAGACAGCGGTGCAGACCAGACACAAAATGGTGGCTCTTTGGAGAAGGACGGAAGACCAAATCGAACCAACCCAGGCCTGCCAGGCTTCTTCAGAGACCAACTCGAGGAAGATGTTAGGTTCCCCTCCTCCATGTCAGATGAAGAAGGGAACGATCCGAAACAGCAGAAAAAGGCAAAGAAGTTGAAGAACCAGATCTCCTCTTTCTTCAGCATGAAAAAGAAGTCAGAAAAGGATAAAGACAAGGATGAGACGCGTCTTCAGAGGCCATCCACACTGACCATCGGCGTAGGGCCAGTACCCGTGGCGCCAGTCATCTCTCCCACACACCCTCCTGAGTTCTATGAGGAGGTGGCTGAGACTCTGGACAGGATTGCTCAGCGGTCCCACAGTATGAAGAGACCCCAAAGGCCCAGCCCACGACCCAGCCCTGCTACCACCCCGGTCAAACCTCCCCCTGAACCTGACAAAGAAGAAATGGTGCGCCAGCTGGTCCAGGTACTGTCTATGGAAGGGGATGCCATCAACTACAAGATCCAGTCGGACCCCTTCCTGCGCTCCACGCTGAACCGTCTCTCATACCCGTCCTTCGCCAAGCTCCTGGACACCTTCGCCAGCCAGGAACAGGCCACGCCCTCACCTCTGCCGCCTCCTGCCAGCAGCCCCACGCTGAGACGAGTGGCCGTCACCATGGAGGTGTCGCGGCGTGTCGTCACAGCAACAGGGATGCAGCGCATGCAGGGCTACGCAGAACGCTATATGGAGAACTTTGCCCCCTGGGTGAAGAGCCATGGAGGATGGGAAAgtattgtccagttggaagagaTTTTGGAGTGCGACTGACAACCCTACACCATCAAGGCAGCTCGGAAATCCTCACTACTTATTTTTAACCTATGACTAAGGCCTGGAGTTGTTTCCTATCAAGTCGGGTACAACTCAAGACCCTTCCTGACCTCAGTTTCTCCTGTGGTGAGAGACGGAGAAGGAGTTAGCTTTTTATAACTCTACGACACGTGAATTATGTCACTTGTATTTGTCTGAGAATCATGTGTACttgtacaattttttttatttttatcaatgTTTTTCTATAAACGTGTTTTACAAAAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1245839 lncRNA upstream 31243 60852444 ~ 60854828 (+) True G1095449
TU1245817 lncRNA upstream 51506 60834274 ~ 60834565 (+) False G1095440
TU1245822 lncRNA upstream 51593 60834274 ~ 60834478 (+) True G1095440
TU1245815 lncRNA upstream 61072 60824717 ~ 60824999 (+) True G1095438
TU1245781 lncRNA upstream 106575 60779263 ~ 60779496 (+) True G1095413
TU1245850 lncRNA downstream 12915 60906339 ~ 60907013 (+) False G1095460
TU1245851 lncRNA downstream 13184 60906608 ~ 60911659 (+) True G1095460
TU1245853 lncRNA downstream 18467 60911891 ~ 60912104 (+) True G1095462
TU1245857 lncRNA downstream 22464 60915888 ~ 60916197 (+) True G1095466
TU1245860 lncRNA downstream 23408 60916832 ~ 60917034 (+) True G1095469
XR_005035059.1 mRNA upstream 41923 60842691 ~ 60844148 (+) False LOC118937692
XR_005035060.1 mRNA upstream 41923 60842691 ~ 60844148 (+) True LOC118937692
XM_036937968.1 mRNA upstream 53971 60827444 ~ 60832100 (+) False LOC110538924
XM_036937967.1 mRNA upstream 53971 60827461 ~ 60832100 (+) False LOC110538924
XM_036937966.1 mRNA upstream 53971 60827464 ~ 60832100 (+) True LOC110538924
XM_021626048.2 mRNA downstream 37699 60931123 ~ 60965921 (+) False mmp25a
XM_021626074.2 mRNA downstream 144300 61037724 ~ 61041909 (+) True LOC110539100
XR_005035062.1 mRNA downstream 186144 61079568 ~ 61079848 (+) True LOC118937694
XR_005035061.1 mRNA downstream 202367 61095791 ~ 61097619 (+) False LOC118937693
XM_021626079.2 mRNA downstream 223274 61116698 ~ 61126203 (+) True LOC110539103
TU1245566 other upstream 67174 60816491 ~ 60818897 (+) True G1095209
TU1245572 other upstream 172059 60696687 ~ 60714012 (+) True LOC110539079
TU1245603 other upstream 500098 60385664 ~ 60385973 (+) True G1095244
TU1244425 other upstream 852051 60031003 ~ 60034020 (+) True G1094218
TU1244093 other upstream 1343468 59541558 ~ 59542603 (+) True G1093909
TU1245870 other downstream 61276 60954700 ~ 60965595 (+) True mmp25a
TU1245937 other downstream 144315 61037739 ~ 61352345 (+) True G1095540
TU1246640 other downstream 1553080 62446504 ~ 62447474 (+) True LOC118937701
TU1247110 other downstream 2409067 63302491 ~ 63334694 (+) True LOC100305204
TU1247501 other downstream 2994672 63888096 ~ 63890557 (+) False LOC110538933

Expression Profile