Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00004000 |
| length | 925 |
| lncRNA type | sense_over |
| GC content | 0.42 |
| exon number | 6 |
| gene id | XLOC_002062 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007121.7 |
| NCBI id | CM002894.2 |
| chromosome length | 45420867 |
| location | 20364009 ~ 20372269 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0006612 | protein targeting to membrane | biological_process |
| GO:0043001 | Golgi to plasma membrane protein transport | biological_process |
| GO:0018230 | peptidyl-L-cysteine S-palmitoylation | biological_process |
| GO:0005795 | Golgi stack | cellular_component |
| GO:0002178 | palmitoyltransferase complex | cellular_component |
| GO:0019706 | protein-cysteine S-palmitoyltransferase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00005869 | lncRNA | upstream | 224411 | 20108557 ~ 20140049 (+) | False | XLOC_002059 |
| TCONS_00003992 | lncRNA | upstream | 229580 | 20132370 ~ 20134880 (+) | True | XLOC_002059 |
| TCONS_00005865 | lncRNA | upstream | 638866 | 19602396 ~ 19725594 (+) | False | XLOC_002058 |
| TCONS_00005870 | lncRNA | downstream | 5390 | 20377088 ~ 20381313 (+) | True | XLOC_002063 |
| TCONS_00005871 | lncRNA | downstream | 76769 | 20448467 ~ 20452630 (+) | True | XLOC_002065 |
| TCONS_00005704 | lncRNA | downstream | 130078 | 20501776 ~ 20502178 (+) | True | XLOC_002066 |
| TCONS_00005872 | lncRNA | downstream | 271637 | 20643335 ~ 20644918 (+) | False | XLOC_002069 |
| TCONS_00005873 | lncRNA | downstream | 272162 | 20643860 ~ 20645459 (+) | True | XLOC_002069 |
| TCONS_00003995 | mRNA | upstream | 107285 | 20256454 ~ 20257175 (+) | True | XLOC_002061 |
| TCONS_00003993 | mRNA | upstream | 130077 | 20180163 ~ 20234383 (+) | False | XLOC_002060 |
| TCONS_00003991 | mRNA | upstream | 217916 | 20128267 ~ 20146544 (+) | False | XLOC_002059 |
| TCONS_00003989 | mRNA | upstream | 223117 | 20108557 ~ 20141343 (+) | False | XLOC_002059 |
| TCONS_00004003 | mRNA | downstream | 20385 | 20392083 ~ 20401485 (+) | False | XLOC_002064 |
| TCONS_00004004 | mRNA | downstream | 20958 | 20392656 ~ 20402161 (+) | True | XLOC_002064 |
| TCONS_00004005 | mRNA | downstream | 218271 | 20589969 ~ 20609075 (+) | False | XLOC_002067 |
| TCONS_00004006 | mRNA | downstream | 218492 | 20590190 ~ 20605986 (+) | False | XLOC_002067 |
| TCONS_00004007 | mRNA | downstream | 236978 | 20608676 ~ 20626795 (+) | True | XLOC_002067 |
| TCONS_00003994 | other | upstream | 130415 | 20221366 ~ 20234045 (+) | True | XLOC_002060 |
| TCONS_00003965 | other | upstream | 1429919 | 18911175 ~ 18934541 (+) | True | XLOC_002047 |
| TCONS_00003963 | other | upstream | 1467856 | 18892047 ~ 18896604 (+) | True | XLOC_002046 |
| TCONS_00003957 | other | upstream | 2113392 | 18240798 ~ 18251068 (+) | True | XLOC_002043 |
| TCONS_00003954 | other | upstream | 2474257 | 17890089 ~ 17890203 (+) | True | XLOC_002040 |
| TCONS_00004010 | other | downstream | 312338 | 20684036 ~ 20684150 (+) | True | XLOC_002071 |
| TCONS_00004011 | other | downstream | 864866 | 21236564 ~ 21236678 (+) | True | XLOC_002075 |
| TCONS_00004013 | other | downstream | 1025622 | 21397320 ~ 21399705 (+) | False | XLOC_002077 |
| TCONS_00004014 | other | downstream | 1025669 | 21397367 ~ 21404971 (+) | False | XLOC_002077 |
| TCONS_00004015 | other | downstream | 1028017 | 21399715 ~ 21402166 (+) | True | XLOC_002077 |
