Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00042754 |
| length | 892 |
| RNA type | mRNA |
| GC content | 0.44 |
| exon number | 8 |
| gene id | XLOC_021516 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007134.7 |
| NCBI id | CM002907.2 |
| chromosome length | 46223584 |
| location | 12454542 ~ 12490001 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0051225 | spindle assembly | biological_process |
| GO:0007098 | centrosome cycle | biological_process |
| GO:0005813 | centrosome | cellular_component |
| GO:0005880 | nuclear microtubule | cellular_component |
| GO:0005737 | cytoplasm | cellular_component |
| GO:0008017 | microtubule binding | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-030131-6830 | Predicted to enable microtubule binding activity. Predicted to be involved in centrosome cycle and spindle assembly. Predicted to be active in centrosome; cytoplasm; and nuclear microtubule. Orthologous to human HAUS8 (HAUS augmin like complex subunit 8). |
| ensembl_id | ENSDART00000143752 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00044788 | lncRNA | upstream | 176247 | 12259536 ~ 12279048 (+) | True | XLOC_021514 |
| TCONS_00044787 | lncRNA | upstream | 247336 | 12207431 ~ 12207959 (+) | False | XLOC_021513 |
| TCONS_00042740 | lncRNA | upstream | 603401 | 11848748 ~ 11851894 (+) | True | XLOC_021507 |
| TCONS_00042736 | lncRNA | upstream | 1080611 | 11347436 ~ 11374684 (+) | False | XLOC_021506 |
| TCONS_00044786 | lncRNA | upstream | 1230690 | 11224124 ~ 11224605 (+) | True | XLOC_021505 |
| TCONS_00044789 | lncRNA | downstream | 208320 | 12673403 ~ 12830266 (+) | False | XLOC_021518 |
| TCONS_00044790 | lncRNA | downstream | 208967 | 12674050 ~ 12830266 (+) | True | XLOC_021518 |
| TCONS_00044791 | lncRNA | downstream | 209844 | 12674927 ~ 12675421 (+) | True | XLOC_021519 |
| TCONS_00044792 | lncRNA | downstream | 233888 | 12698971 ~ 12700414 (+) | True | XLOC_021520 |
| TCONS_00042759 | lncRNA | downstream | 375017 | 12840100 ~ 12853164 (+) | False | XLOC_021521 |
| TCONS_00042751 | mRNA | upstream | 41213 | 12406722 ~ 12414082 (+) | True | XLOC_021515 |
| TCONS_00042750 | mRNA | upstream | 43261 | 12361899 ~ 12412034 (+) | False | XLOC_021515 |
| TCONS_00042748 | mRNA | upstream | 226932 | 12198242 ~ 12228363 (+) | False | XLOC_021513 |
| TCONS_00042747 | mRNA | upstream | 292541 | 12160900 ~ 12162754 (+) | True | XLOC_021512 |
| TCONS_00042746 | mRNA | upstream | 317120 | 12134846 ~ 12138175 (+) | True | XLOC_021511 |
| TCONS_00042756 | mRNA | downstream | 80031 | 12545114 ~ 12612934 (+) | False | XLOC_021517 |
| TCONS_00042757 | mRNA | downstream | 80099 | 12545182 ~ 12562846 (+) | True | XLOC_021517 |
| TCONS_00042758 | mRNA | downstream | 374997 | 12840080 ~ 12897576 (+) | False | XLOC_021521 |
| TCONS_00042760 | mRNA | downstream | 375093 | 12840176 ~ 12863555 (+) | False | XLOC_021521 |
| TCONS_00042761 | mRNA | downstream | 387572 | 12852655 ~ 12897815 (+) | True | XLOC_021521 |
| TCONS_00042749 | other | upstream | 236920 | 12213967 ~ 12218375 (+) | True | XLOC_021513 |
| TCONS_00042745 | other | upstream | 304628 | 12134839 ~ 12150667 (+) | False | XLOC_021511 |
| TCONS_00042743 | other | upstream | 371624 | 12083557 ~ 12083671 (+) | True | XLOC_021510 |
| TCONS_00042741 | other | upstream | 519595 | 11935584 ~ 11935700 (+) | True | XLOC_021508 |
| TCONS_00042731 | other | upstream | 1848749 | 10601324 ~ 10606546 (+) | True | XLOC_021503 |
| TCONS_00042766 | other | downstream | 977525 | 13442608 ~ 13442722 (+) | True | XLOC_021525 |
| TCONS_00042770 | other | downstream | 1139135 | 13604218 ~ 13604320 (+) | True | XLOC_021527 |
| TCONS_00042779 | other | downstream | 2002920 | 14468003 ~ 14470571 (+) | True | XLOC_021539 |
| TCONS_00042786 | other | downstream | 2888050 | 15353133 ~ 15353249 (+) | True | XLOC_021542 |
| TCONS_00042789 | other | downstream | 3284935 | 15750018 ~ 15751546 (+) | True | XLOC_021546 |
