Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00043045 |
| length | 850 |
| RNA type | processed_transcript |
| GC content | 0.51 |
| exon number | 6 |
| gene id | XLOC_021693 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007134.7 |
| NCBI id | CM002907.2 |
| chromosome length | 46223584 |
| location | 24598910 ~ 24661950 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0000123 | histone acetyltransferase complex | cellular_component |
| id | description |
|---|---|
| ko03036 | Chromosome and associated proteins |
| id | description |
|---|---|
| ZDB-GENE-041010-67 | Predicted to be located in nucleus. Predicted to be part of histone acetyltransferase complex. Is expressed in notochord. Orthologous to human KANSL2 (KAT8 regulatory NSL complex subunit 2). |
| ensembl_id | ENSDART00000145707 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00044825 | lncRNA | upstream | 106960 | 24483312 ~ 24492037 (+) | False | XLOC_021689 |
| TCONS_00044826 | lncRNA | upstream | 106960 | 24483513 ~ 24492037 (+) | False | XLOC_021689 |
| TCONS_00043039 | lncRNA | upstream | 113166 | 24485473 ~ 24485831 (+) | True | XLOC_021689 |
| TCONS_00044824 | lncRNA | upstream | 458587 | 24133781 ~ 24140410 (+) | True | XLOC_021686 |
| TCONS_00043035 | lncRNA | upstream | 507075 | 24088105 ~ 24091922 (+) | True | XLOC_021684 |
| TCONS_00043052 | lncRNA | downstream | 1835 | 24606253 ~ 24609203 (+) | False | XLOC_021693 |
| TCONS_00043067 | lncRNA | downstream | 534973 | 25139391 ~ 25146413 (+) | True | XLOC_021700 |
| TCONS_00043076 | lncRNA | downstream | 687537 | 25291955 ~ 25295814 (+) | False | XLOC_021704 |
| TCONS_00044827 | lncRNA | downstream | 701018 | 25305436 ~ 25306603 (+) | True | XLOC_021705 |
| TCONS_00043090 | lncRNA | downstream | 1252252 | 25856670 ~ 25857283 (+) | False | XLOC_021710 |
| TCONS_00043043 | mRNA | upstream | 120 | 24589633 ~ 24598877 (+) | True | XLOC_021692 |
| TCONS_00043040 | mRNA | upstream | 90176 | 24501918 ~ 24508821 (+) | False | XLOC_021690 |
| TCONS_00043038 | mRNA | upstream | 307070 | 24272421 ~ 24291927 (+) | True | XLOC_021688 |
| TCONS_00043036 | mRNA | upstream | 467035 | 24124684 ~ 24131962 (+) | True | XLOC_021685 |
| TCONS_00043034 | mRNA | upstream | 485790 | 24085531 ~ 24113207 (+) | False | XLOC_021684 |
| TCONS_00043050 | mRNA | downstream | 63 | 24604481 ~ 24609494 (+) | False | XLOC_021693 |
| TCONS_00043053 | mRNA | downstream | 7329 | 24611747 ~ 24661950 (+) | True | XLOC_021693 |
| TCONS_00043054 | mRNA | downstream | 101006 | 24705424 ~ 24750935 (+) | True | XLOC_021694 |
| TCONS_00043055 | mRNA | downstream | 184787 | 24789205 ~ 24797586 (+) | True | XLOC_021695 |
| TCONS_00043056 | mRNA | downstream | 321989 | 24926407 ~ 24939148 (+) | False | XLOC_021696 |
| TCONS_00043042 | other | upstream | 38124 | 24556455 ~ 24560873 (+) | True | XLOC_021691 |
| TCONS_00043041 | other | upstream | 91716 | 24501965 ~ 24507281 (+) | True | XLOC_021690 |
| TCONS_00043037 | other | upstream | 450226 | 24148055 ~ 24148771 (+) | True | XLOC_021687 |
| TCONS_00043033 | other | upstream | 524842 | 24074083 ~ 24074155 (+) | True | XLOC_021683 |
| TCONS_00043032 | other | upstream | 525101 | 24073815 ~ 24073896 (+) | True | XLOC_021682 |
| TCONS_00043051 | other | downstream | 1819 | 24606237 ~ 24606374 (+) | False | XLOC_021693 |
| TCONS_00043063 | other | downstream | 378884 | 24983302 ~ 24984858 (+) | True | XLOC_021698 |
| TCONS_00043088 | other | downstream | 1252211 | 25856629 ~ 25863966 (+) | False | XLOC_021710 |
| TCONS_00043091 | other | downstream | 1256980 | 25861398 ~ 25862297 (+) | True | XLOC_021710 |
| TCONS_00043095 | other | downstream | 1275350 | 25879768 ~ 25897009 (+) | False | XLOC_021712 |
