RNA id: TCONS_00044091


Basic Information

Item Value
RNA id TCONS_00044091
length 966
RNA type mRNA
GC content 0.49
exon number 2
gene id XLOC_022344
representative True

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 24046032 ~ 24047054 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

ATGGTTAAGACCAAAGAACTCTCTCaggacctcagagacaggattgttgaCCTGCACAAATCTGGAACGGGCTACAAAAACATCAGCAAGATGCTGGGGATTAAAGTAACAACCATTGGTGCAATTGTGAGAAAATTTAAGAAGTATAACCTGACCATCAATAGACCTTGGTCTGGTGCTCCACAAAAGATTTCACCTCGTGGGGTGGCAATGATCATGAGAACTGTGAGAAATCGGCCTGCAACCACACAGCAGGAGTTAGTGAATGACCTCAAGGCAGCTGGGACCACAGTCACCAGGAAAACAATTGGCAACACTTTGCGCCGCAATGGATTAAAATCCTGCAGTGCCCGAAAGGTACCTCTGCTTAAGAAGGCACATGTGAAGGCCCGCCTAAAGTATGCCAATGATCACCTCAAAGATGTACAAAGTGATTGGGAGAAGGTTCTGTGGAAGAAAAATGCTGCCTATGACCCCAGGAACACTGTACCCACCGTCAAGCATGGAGGTGGAAGCATTATGTTTTGGGGTTGTTTCTCTGCCAAGGGCATAGGGCTACTTCACCGCATCAGTGGGAAGATGGATGGAGCCATGTACTGTGCAGTCCTGTGGGACAACCTCCTCCCCTCTGCCAGGAAGTTGAAAATGGGCCGTGGTTGGGTCTTCCAACATGACAACGACCCGAAGCATACAGCAAAGGCAACAAAGGAGTGGCTCAAGAAGAACCACATTAAGGTCATGGAGTGGCCCAGCCAGTCTCCGGACCTCAATCCAATCGAAAATCTATGGAGGGAGCTGAAGGTCCAAGTTGCCAAGCGACAGCCCACCAACCTTAATGATTTAGAGAGGATCTGCAAAGAAGAGTGGGCCAAAATTCCCCCTGATATGTGTGCTAACCTTGTGGTTAAGTACAACAAACGTCTGTCCGCTGTGCTTGCAAACAAAGGCTGTGCCACCAAGTATTAG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000184308

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00044734 lncRNA downstream 596949 23447451 ~ 23449083 (-) True XLOC_022343
TCONS_00044090 lncRNA downstream 596975 23379465 ~ 23449057 (-) False XLOC_022343
TCONS_00045007 lncRNA downstream 658807 23379465 ~ 23387225 (-) False XLOC_022343
TCONS_00045006 lncRNA downstream 792237 23193876 ~ 23253795 (-) True XLOC_022341
TCONS_00045005 lncRNA downstream 1022037 23012288 ~ 23023995 (-) True XLOC_022339
TCONS_00044735 lncRNA upstream 10356 24057410 ~ 24059462 (-) False XLOC_022345
TCONS_00045008 lncRNA upstream 11591 24058645 ~ 24115957 (-) True XLOC_022345
TCONS_00044096 lncRNA upstream 101284 24148338 ~ 24167350 (-) True XLOC_022346
TCONS_00045009 lncRNA upstream 137467 24184521 ~ 24186651 (-) False XLOC_022348
TCONS_00044100 lncRNA upstream 137467 24184521 ~ 24187176 (-) True XLOC_022348
TCONS_00044089 mRNA downstream 644727 23399520 ~ 23401305 (-) False XLOC_022343
TCONS_00044088 mRNA downstream 789306 23254976 ~ 23256726 (-) True XLOC_022342
TCONS_00044086 mRNA downstream 866615 23126130 ~ 23179417 (-) False XLOC_022340
TCONS_00044093 mRNA upstream 92989 24140043 ~ 24146591 (-) False XLOC_022346
TCONS_00044094 mRNA upstream 93024 24140078 ~ 24148646 (-) False XLOC_022346
TCONS_00044097 mRNA upstream 123617 24170671 ~ 24190712 (-) False XLOC_022347
TCONS_00044098 mRNA upstream 123867 24170921 ~ 24195519 (-) False XLOC_022347
TCONS_00044099 mRNA upstream 125905 24172959 ~ 24195519 (-) False XLOC_022347
TCONS_00044084 other downstream 1182461 22863457 ~ 22863571 (-) True XLOC_022338
TCONS_00044083 other downstream 1395454 22643664 ~ 22650578 (-) True XLOC_022337
TCONS_00044082 other downstream 1398350 22643404 ~ 22647682 (-) False XLOC_022337
TCONS_00044058 other downstream 2531686 21499585 ~ 21514346 (-) False XLOC_022322
TCONS_00044044 other downstream 3707435 20325741 ~ 20338597 (-) True XLOC_022305
TCONS_00044095 other upstream 101284 24148338 ~ 24167317 (-) False XLOC_022346
TCONS_00044112 other upstream 396128 24443182 ~ 24444254 (-) False XLOC_022355
TCONS_00044122 other upstream 524802 24571856 ~ 24582421 (-) True XLOC_022362
TCONS_00044126 other upstream 628153 24675207 ~ 24675303 (-) True XLOC_022366
TCONS_00044131 other upstream 802433 24849487 ~ 24849604 (-) True XLOC_022369

Expression Profile

//