Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1554406 |
| length | 227 |
| lncRNA type | inter_gene |
| GC content | 0.31 |
| exon number | 1 |
| gene id | G1359976 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 28549755 ~ 28549981 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1554404 | lncRNA | downstream | 1236 | 28548280 ~ 28548519 (-) | True | G1359974 |
| TU1554320 | lncRNA | downstream | 48514 | 28492426 ~ 28501241 (-) | True | G1359890 |
| TU1554325 | lncRNA | downstream | 76526 | 28472188 ~ 28473229 (-) | True | G1359895 |
| TU1554329 | lncRNA | downstream | 79973 | 28469532 ~ 28469782 (-) | True | G1359899 |
| TU1554226 | lncRNA | downstream | 236348 | 28274766 ~ 28313407 (-) | True | G1359812 |
| TU1554407 | lncRNA | upstream | 1904 | 28551885 ~ 28552455 (-) | True | G1359977 |
| TU1554319 | lncRNA | upstream | 10335 | 28560316 ~ 28567880 (-) | True | G1359889 |
| TU1554429 | lncRNA | upstream | 48385 | 28598366 ~ 28598608 (-) | True | G1359999 |
| TU1554431 | lncRNA | upstream | 55757 | 28605738 ~ 28605947 (-) | True | G1360001 |
| TU1554433 | lncRNA | upstream | 57402 | 28607383 ~ 28607615 (-) | True | G1360003 |
| XM_021565553.2 | mRNA | downstream | 9110 | 28535317 ~ 28540645 (-) | True | LOC110491790 |
| XM_021565550.2 | mRNA | downstream | 15578 | 28478779 ~ 28534177 (-) | True | LOC110491788 |
| XM_021565552.2 | mRNA | downstream | 17473 | 28478779 ~ 28532282 (-) | False | LOC110491788 |
| XM_036946697.1 | mRNA | downstream | 103084 | 28388779 ~ 28446671 (-) | False | si:ch211-180a12.2 |
| XM_036946703.1 | mRNA | upstream | 76151 | 28626132 ~ 28764615 (-) | False | afap1l2 |
| XM_036946700.1 | mRNA | upstream | 76151 | 28626132 ~ 28767000 (-) | False | afap1l2 |
| XM_036946701.1 | mRNA | upstream | 76151 | 28626132 ~ 28767000 (-) | False | afap1l2 |
| XM_036946702.1 | mRNA | upstream | 76151 | 28626132 ~ 28767001 (-) | False | afap1l2 |
| XR_005036500.1 | mRNA | upstream | 76151 | 28626132 ~ 28767002 (-) | True | afap1l2 |
| TU1554186 | other | downstream | 368815 | 28177715 ~ 28180940 (-) | True | taok2b |
| TU1554168 | other | downstream | 385528 | 28163463 ~ 28164227 (-) | True | G1359763 |
| TU1553783 | other | downstream | 1021618 | 27527163 ~ 27528137 (-) | True | G1359412 |
| TU1553687 | other | downstream | 1190193 | 27357284 ~ 27359562 (-) | True | G1359321 |
| TU1553462 | other | downstream | 1436354 | 27112234 ~ 27113401 (-) | True | G1359119 |
| TU1555797 | other | upstream | 947132 | 29497113 ~ 29497555 (-) | True | G1361290 |
| TU1556170 | other | upstream | 1373890 | 29923871 ~ 29925154 (-) | True | G1361619 |
| TU1558520 | other | upstream | 3089456 | 31639437 ~ 31650697 (-) | True | G1363836 |
| TU1558829 | other | upstream | 3335768 | 31885749 ~ 31886112 (-) | True | G1364105 |
| TU1559113 | other | upstream | 3468813 | 32018794 ~ 32019498 (-) | True | G1364348 |
