RNA id: XM_036966511.1


Basic Information

Item Value
RNA id XM_036966511.1
length 5327
RNA type mRNA
GC content 0.45
exon number 26
gene id LOC110508657
representative True

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 17867728 ~ 17986867 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

CGATTCGCAGCACTCCGCACATGTCTGTTTGGGCTTGACAGCTGTGATCTCACTGCTGTAGTTAGTTATCATGACTTCTCCCAATGCGCCGGTGAAAGTGACTCAAAAGCAAGACGAGCAGGAGCTGGTGGGCAGTGcccctccacagaggaactggaaGGGGATAGTCATCGCCCTGCTGGTCATCTGCATCATCTTGTCTCTGATTGTCACCGCTGTCATCGTGCTCACCCCAATTGCAGATGATAGCCTTGCCCTCAAGAAGAAAGTCACCATTGAGGACGTCTTCGGAGGAGATTTTCATGTGCACGACCCCGACGCTACATGGCTCAGCGACAATGTACTGCTGTATCGAACACAAGAAGGGGATGTGGTCAAACTCAACGTCGAAACACAGGAGAGGGTCGTTTTGGTGGAGAACAGGATGTTTGAAATGTATAAAGCCACCAAGTACCAAATATCTCCAGACCTGGAACATGTGTTGTTGGCCTACAACGTGGCCCCAATCTACCAGCACTCCTACATGGCATTCTACATCATCTGTAGTCTCATCACCCCGGAAACATGGAGTCTGAATCCTCCTGAGGTACGGAACTCCCTCCTGCAGTATGCTGGATGGGGACCCAAGGGCCAACAGTTGATCTTTATCTTTGAGAACAACATCTACTACAGAGCGACAGTGGAGAGCAGAACCATTCGCCTGGTGTCCACAGGGAAGGAGCGAGTCATCTTCAATGGCCTGAGTGACTGGCTGTATGAAGAGGAGATACTGCAGACCCACATAGCCCATTGGTGGTCTCCAGACGGTCTCAGACTGGCCTATGCCACCATCAACGACACCCTGGTGCGCAAGATGGAGGTCCCCATCTTCACTGGCGCCCTGTATCCAACAGGGCTGGAGTGTCACTACCCTAAGGCTGGGGAGGACAACCCTGTAGTACACCTGTCTGTGGTGAGTCTGAACGGACCCCTTCACACGGTGGAGATGAAGAAGCCAGACGACCCCAGGATAGGAAGAGAATATTACATCACAATGGTAAAGTGGGCCACCAGCACCAAGCTGGCAGTCAATTGGCTGAACAGAGCTCAGAACAACTCCATACTGACACTGTGTGAGGCCACCACAGGAGTGTGCACCAAGAAACATGAGGATGAAAGTGAGGGCTGGCTACACAGACAGAACGAGGAGCCACTCTTCTCCCATGATGGATACAAGTTCTTCTTCACCAGAGCTATTCCTCAGGGTGGAAGGGGAAAGTTCTTCCATATCTCCATGTCCACCTCCCAGCCCAACACCAGCACAGACACTCTGCAGTCCCTGACATCAGGAGACTGGGACGTGACTCAGATACTGGCCTACAGCCAAGAAAGGCAGCTCATATACTTTTTGAGCACAGAGGATGATCCAAAACGACGACACCTCTACAGTGCGGACACCAATGGCCCATTTAACCGCTGCTGTCTGTCGTGTGAGTTCAAGTGTGGCTATGTGGACGGCTCCTTCAGCCACAACATGCAGTACTTCCTGCTCAACTGTAAAGGCCCTGATGTACCCAGTGTTGCCATCTACAGTACCAAAGACATACAGAAGGTCCTGGACCTGGAGACTAACGAGGGAGTGAATAACACGTACCACAGCATGCAGATGCCCAAAGTGGAGTACGAGACCATCACCATAGATGATTACACTCTGACAATGCAGATCCTGAAGCCAGCTGGTTTCATAGACACAGCTCACTACCCCCTACTGCTACTAGTAGACGGAACACCTGGCGGACAGATGGTGACAGAGCAGTTCCGTGTGGACTGGGCCACGGTGCTGGTGAGCAGTTACAGCACCATTGTGATCCGCTTCGATGGCCACGGGTCCGGGTTCCAGGGCACCAAGCTCCTCCACCACATTAGGAGGAAACTGGGTGTGATCGAGGAGAGGGACCAGATGGAGGCACTCAGACTGATATCCAAAGAAATGTACATCGACAAAAGTCGAATGGGAGTATATGGAAAGGTTTACGGAGGGTATTTGGCCACAATGCTTTTAAGTTCTGATGACTCCCTGCTTAAATGTGGAGCCGCCGTCTCACCCATCACAGATTTTGAGTTATACGCTTCAGCATTTTCAGAGCGGTACCTTGGATCACCAAAGACAGACTCTCGAATATACTCGATGGCCAGTTTAGCACATCGGGCAGGTCGTCTCATGGACAGGAAGTACATGATTATCCATCCAACCGCTGATGAGAAAGTCCATTTCCAGCACTCTGCAAAATTCATCAACCATTTAATCAACGAGAAGGCAAATTACTCTTTACAGATCTACCCAGACGAGGGACACTTCCTGCATAGCGATGGCACTCGGCAACACCTGAGCCAATCACTGGTCAACTTCTTTGAGGAGTGTTTCCGACTGCCGGACTTACCGAGCGAGGAAGAGAAGGACAAGGAGGATGAGGGCGATGGTTAAACCAGCTGACACATGGTTAACGCTCTAGCCAGTTACTACAGCACAATATGCAACAAATCTTTCTCAACTCATTACCCCCACCCATAGCCTgtttccagatctgtttgtgccgtctTGCCAACTCAGCTGGTCAGCTAATGATAATTTAGAGTTGGCATTGGTgaaacagatctaggatcaggctaACCTACTCCATCCTCTGTATAATTTGGGCTTCTCTTTAGGGCACAGTACCTGCATGTACCACTAACCTCACACCTCACCCttttcctcttcctcatcacttcTGGTTGGCTGACAACTGGACTGGCCAGCAGACATCAAATTGTGCTGCTGTTTTTATCCTCTTAGATGTAATGGCAAAATGTAGATTTTCTCCTAAATAGAAATACTCAAAGGTAACTACTATTCATGTGTAATTACATCATTCTGACATGCAAAAACGTGGTATATTTGAAAAGATGACATCTGGGAATCAGAAGATAGGAGTTACATAGTTCAGAATACACAagatcaagcacacacaaaatcatttttattttgaAAGTAATCGCTCATTGACAAGCTATAAGTGAATTATTGATGCCAAGAGCTGGAAACACATGTGATGGCTTCCACAACATGTGAACAATATCAGGAAAAAAATGGGATTGATAGACCTAACAACTAGAAATGGCAGATGTTTTAGTAAGTGGTGTCAGGTGTGGTCACATAACGTTTCCAAGTGTCCCTAAACCTCTCCAAAGCGGCATATGTCTGTAAATTAGATAATTCCAGTGCTATTACATATTTGGAATCCCTTAATGcgatttgttcagtataaaacacACTTTCTACCATATCAACCTCACTCAAACATTGTGATGGTGTTATTCAAGTGTCCtttcaacctctccaaagtgtctAAATGTGGTAATTGCACTGTTTTTGCACACTGCATGTGCCCAAAGGTTAATGTTCACTATAAAAACTAAATTTCTACAACACCAACCTCTCGCAAACATTTGCGGGGTGTCGGACATACAGGGGATATCCAATGTGTTTTCATCATATTTTTCATGCGCAAATATAGTGACTCGATGTTGCCATTAAGTCATGTCATCAGATACATTTGGCAATAGGCTAAATTTGTTCCTACCAACCTAGAGATTAATGTCATACCCCCATTTAGCTATAGCTCAAACACAGACCCAATCGAAGTTTACCTTTGCTGTTTGGTGAAAACGTGTAAAATCAACAACTGTACGTCACATGCAGACAAATAAGACATCCTCATGATGTGGTATCCTGGTTTACGGTATGAATCAACGTATTCCATGTTGATTTCGTTTATGCCTCACAAGGCTAACCGGAATGTAGGTAGCAGACATCTTGAAACGAGGTCATCGGCTCGGCCAGCCCTTATGTCCATATATGGCAGTAACTCACCAAAGCTTCTAAGGCACAGATCAACAGCAAAGATACTCCGCTTTCCGCAGATACCCTGCTTTTGCAAATAGGGGCTACCGTTCTCATACCAGACTGAACTGAAAAATTAAATAGGGTCCCCAAATAATGGGTACTTTACATTTAAGAGGTTAACACCGGAATCACGGAAACAATCAGAAACGTTCTGGTGGTTGGTGAATTATGTAATTTGACGATGGTACCACCCCTGTCCTCCATCTTTACTGCATTGGAATTTATTAGCCATAACATTCGTAGGGGAACTTTTGTGCTAAAGACGTGTGTGGGGGAGAGGAGATACAACCCACAGGCGGTGTTgactctggtaaaaaaaaaaaaaaaaaaaaaaaactcttagCAGTGCTCCAAGTTATTTTTCTGGACCAAATAAACTGATCACTGAAGGAGACCAGTAAACCCACCTGTGAATGTTAGATGCTGTAGTGAACCACCCCAACGGCATCCGTGTAGGGATGCAGCACAAAATATCCCATATTCCCTTCCCAAATATCATGGCTAATCAATTCCAATGCAGTAAAGATGGAGGGAACATACAGGAGCTACCCATTGTTGGTACCATCATTATAAATTACAATTCAACAACTTTCTGAGGATTGTATCCATGATACTAAAACAGCAGTAGCATTTATTTATCTTAATTGGGGTTTGTAATGTTCAGTATGGCTTTGAATTGATGTACGGTGGTTACATTTGGACATCCTTTCCAAATGAGGACACAATGTTAGAGACTACATGTTTGTTAAACTATTTTGACCTCTTTTGGGGTTATTACATTCAGTAGGACATTTATTTTCATTTGGAATGGAGCTCTAGTGTTGTTAGTCACTGTGCCTTACTACTAGGGGTTAACCAAGGTATTCATGTCAGGGACTATAAACCCTTCAATGGAAACATAACTTTTCATTTTTCATGTAAGCAAGATTGGTCAAAGCCAGCCCCCAGTTGTCCTTCTGCCAACAACTGCAGGCACATGTGGAGCTCTATAGTTATATACAAACAAATATTGTACAACATGACACGTAATGACTTCAGTTGAATCGTTACAATCTGACCAGTCTGTATGTAGGAACATGTGATTTTATAACACCCATTATATATGTACTATAACACAGTAATATTGTGCTTGTATAAAATAGACACCTGAACATGTTCTGGCTGTTGTAACTACATCAAAGGTTCTTGAGGCACATTCAGTGTATCTTTTCTAATTTGGCAAGTTACAATGTTTGGTTATTTGTTAAACAGCTTGAATGTCCGTCGAGATGTCATTTCTGTTAGTATTGTCAGTGAAAGTTTCTagtcagctgatgtacaaaatgTATAAATCTTACATTGTTGAAAAGTCCTGAACTATGTGTGTGCGACTTGTACATAAAGCATTTTCAAATTTATCCGA

Function

GO: NA

KEGG:

id description
K23013 DPP6; dipeptidyl aminopeptidase-like protein 6

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2415329 lncRNA upstream 94030 17816275 ~ 17816497 (+) True G2112066
TU2415293 lncRNA upstream 120831 17789435 ~ 17789696 (+) True G2112034
TU2415285 lncRNA upstream 127023 17783074 ~ 17783504 (+) True G2112026
TU2415270 lncRNA upstream 138390 17771887 ~ 17772137 (+) True G2112011
TU2415265 lncRNA upstream 141444 17768832 ~ 17769083 (+) True G2112006
TU2415328 lncRNA downstream 203 17987070 ~ 17992781 (+) True G2112065
TU2415690 lncRNA downstream 87852 18074719 ~ 18075017 (+) True G2112390
TU2415697 lncRNA downstream 93940 18080807 ~ 18082780 (+) True G2112396
TU2415727 lncRNA downstream 121396 18108263 ~ 18109724 (+) True G2112426
TU2415820 lncRNA downstream 242983 18229850 ~ 18230082 (+) True G2112517
XR_005040240.1 mRNA upstream 85805 17813849 ~ 17824722 (+) True LOC118944855
XM_036966199.1 mRNA upstream 356540 17497781 ~ 17553987 (+) True LOC110508652
LOC110508651 mRNA upstream 421037 17480111 ~ 17489490 (+) True LOC110508651
XM_021589334.2 mRNA upstream 499864 17402896 ~ 17410663 (+) False LOC110508649
XM_021588579.2 mRNA downstream 238445 18225312 ~ 18228347 (+) False gs04
NM_001124606.1 mRNA downstream 239371 18226238 ~ 18228390 (+) True gs04
XM_036966800.1 mRNA downstream 329749 18316616 ~ 18354743 (+) False LOC110508661
XM_036966795.1 mRNA downstream 329750 18316617 ~ 18354743 (+) False LOC110508661
XM_036966798.1 mRNA downstream 329996 18316863 ~ 18354372 (+) False LOC110508661
TU2415395 other upstream 6603 17903198 ~ 17903924 (+) True G2112127
TU2414674 other upstream 154946 17754937 ~ 17755581 (+) True G2111491
TU2414638 other upstream 201898 17708256 ~ 17708629 (+) True G2111457
TU2414472 other upstream 494295 17411144 ~ 17416232 (+) True G2111300
TU2414198 other upstream 951675 16953784 ~ 16958852 (+) True G2111044
TU2416413 other downstream 680248 18667115 ~ 18668496 (+) True G2113059
TU2416973 other downstream 1089210 19076077 ~ 19076418 (+) True G2113578
TU2417581 other downstream 1636601 19623468 ~ 19636753 (+) True LOC110508695
TU2418949 other downstream 2454866 20441733 ~ 20442169 (+) True G2115369
TU2419398 other downstream 2853703 20840570 ~ 20842003 (+) True LOC110508722

Expression Profile