RNA id: TU2414036



Basic Information


Item Value
RNA id TU2414036
length 290
lncRNA type inter_gene
GC content 0.42
exon number 1
gene id G2110892
representative True

Chromosome Information


Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 16766994 ~ 16767283 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


CCGCAAGCAGACACGTTTTTTTACGGGATCTCCTATGTGTGCGTGTAACCGGTGCTGTACTGcaccgctgtaactctgcgttgtgtgtggttgatagAGACTATAaacgtggactttggagatcaggtagttttaatcaagcagaactgactctctgcatcctgcatctgcatccaaaaggaaataaaacatttgtagagcacatatgttctgagaatcgtcgtctctttctctctcagtgcatcaaaatgatttccGAATACAAAATTAATACAGTCTCTCCTTATTAT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2414034 lncRNA upstream 599 16766195 ~ 16766395 (+) True G2110890
TU2414024 lncRNA upstream 9065 16757692 ~ 16757929 (+) True G2110881
TU2413710 lncRNA upstream 203165 16563405 ~ 16563829 (+) True G2110575
TU2413704 lncRNA upstream 209369 16557421 ~ 16557625 (+) True G2110569
TU2413666 lncRNA upstream 249693 16479800 ~ 16517301 (+) True G2110531
TU2414071 lncRNA downstream 25105 16792388 ~ 16792609 (+) True G2110927
TU2414082 lncRNA downstream 32137 16799420 ~ 16800068 (+) True G2110938
TU2414084 lncRNA downstream 33996 16801279 ~ 16801481 (+) True G2110940
TU2414115 lncRNA downstream 68552 16835835 ~ 16836586 (+) True G2110968
TU2414155 lncRNA downstream 120257 16887540 ~ 16889267 (+) True G2111002
XM_036965888.1 mRNA upstream 225415 16458212 ~ 16541579 (+) True LOC110508639
LOC110508172 mRNA upstream 470715 16295344 ~ 16296279 (+) True LOC110508172
XM_021589302.2 mRNA upstream 573867 16170026 ~ 16193127 (+) False LOC110508638
XM_036966542.1 mRNA downstream 42188 16809471 ~ 16813125 (+) False LOC110508278
XM_021589308.2 mRNA downstream 56976 16824259 ~ 16839283 (+) False LOC110508640
XM_021589305.2 mRNA downstream 57729 16825012 ~ 16839283 (+) False LOC110508640
XM_021589307.2 mRNA downstream 57732 16825015 ~ 16839283 (+) False LOC110508640
XM_021589306.2 mRNA downstream 58209 16825492 ~ 16839283 (+) False LOC110508640
TU2413642 other upstream 318492 16448112 ~ 16448502 (+) True G2110507
TU2413068 other upstream 818133 15948308 ~ 15948861 (+) True G2109955
TU2413061 other upstream 828137 15938511 ~ 15938857 (+) True G2109948
TU2409894 other upstream 2853767 13911427 ~ 13913227 (+) True G2107033
TU2409352 other upstream 3623399 13143313 ~ 13143595 (+) True G2106557
TU2414093 other downstream 45311 16812594 ~ 16812796 (+) True LOC110508278
TU2414198 other downstream 186501 16953784 ~ 16958852 (+) True G2111044
TU2414472 other downstream 643861 17411144 ~ 17416232 (+) True G2111300
TU2414638 other downstream 940973 17708256 ~ 17708629 (+) True G2111457
TU2414674 other downstream 987654 17754937 ~ 17755581 (+) True G2111491

Expression Profile