Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00006158 |
| length | 912 |
| RNA type | mRNA |
| GC content | 0.44 |
| exon number | 6 |
| gene id | XLOC_003117 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007122.7 |
| NCBI id | CM002895.2 |
| chromosome length | 45484837 |
| location | 714386 ~ 718748 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0010951 | negative regulation of endopeptidase activity | biological_process |
| GO:0051045 | negative regulation of membrane protein ectodomain proteolysis | biological_process |
| GO:0009725 | response to hormone | biological_process |
| GO:0034097 | response to cytokine | biological_process |
| GO:0010033 | response to organic substance | biological_process |
| GO:0031012 | extracellular matrix | cellular_component |
| GO:0005576 | extracellular region | cellular_component |
| GO:0005615 | extracellular space | cellular_component |
| GO:0002020 | protease binding | molecular_function |
| GO:0008191 | metalloendopeptidase inhibitor activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-070824-1 | Predicted to enable metalloendopeptidase inhibitor activity and protease binding activity. Predicted to be involved in negative regulation of proteolysis; response to cytokine; and response to hormone. Predicted to act upstream of or within negative regulation of peptidase activity. Predicted to be located in extracellular region. Predicted to be active in extracellular matrix and extracellular space. Human ortholog(s) of this gene implicated in nephroblastoma. Orthologous to human TIMP4 (TIMP metallopeptidase inhibitor 4). |
| ensembl_id | ENSDART00000167824 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00008508 | lncRNA | upstream | 170192 | 543348 ~ 544194 (+) | True | XLOC_003112 |
| TCONS_00006151 | lncRNA | upstream | 174779 | 537022 ~ 539607 (+) | True | XLOC_003111 |
| TCONS_00008507 | lncRNA | upstream | 209557 | 498446 ~ 504829 (+) | False | XLOC_003109 |
| TCONS_00006149 | lncRNA | upstream | 209557 | 501654 ~ 504829 (+) | True | XLOC_003109 |
| TCONS_00008506 | lncRNA | upstream | 219853 | 489935 ~ 494533 (+) | True | XLOC_003110 |
| TCONS_00006167 | lncRNA | downstream | 803586 | 1522127 ~ 1524414 (+) | False | XLOC_003124 |
| TCONS_00006170 | lncRNA | downstream | 806369 | 1524910 ~ 1526754 (+) | True | XLOC_003124 |
| TCONS_00008509 | lncRNA | downstream | 894859 | 1613400 ~ 1615142 (+) | True | XLOC_003129 |
| TCONS_00008376 | lncRNA | downstream | 1217143 | 1935684 ~ 1937142 (+) | False | XLOC_003132 |
| TCONS_00008510 | lncRNA | downstream | 1217149 | 1935690 ~ 1997410 (+) | False | XLOC_003132 |
| TCONS_00006157 | mRNA | upstream | 3354 | 705727 ~ 711032 (+) | True | XLOC_003116 |
| TCONS_00006156 | mRNA | upstream | 13081 | 691734 ~ 701305 (+) | True | XLOC_003115 |
| TCONS_00006155 | mRNA | upstream | 125258 | 583725 ~ 589128 (+) | True | XLOC_003114 |
| TCONS_00006154 | mRNA | upstream | 127199 | 583142 ~ 587187 (+) | False | XLOC_003114 |
| TCONS_00006152 | mRNA | upstream | 133553 | 575665 ~ 580833 (+) | False | XLOC_003113 |
| TCONS_00006162 | mRNA | downstream | 51082 | 769623 ~ 772459 (+) | True | XLOC_003119 |
| TCONS_00006163 | mRNA | downstream | 61213 | 779754 ~ 790304 (+) | True | XLOC_003120 |
| TCONS_00006164 | mRNA | downstream | 88612 | 807153 ~ 815216 (+) | True | XLOC_003121 |
| TCONS_00006165 | mRNA | downstream | 691081 | 1409622 ~ 1412356 (+) | True | XLOC_003122 |
| TCONS_00006166 | mRNA | downstream | 794030 | 1512571 ~ 1520946 (+) | True | XLOC_003123 |
| TCONS_00006147 | other | upstream | 342946 | 371322 ~ 371440 (+) | True | XLOC_003107 |
| TCONS_00006161 | other | downstream | 12266 | 730807 ~ 730923 (+) | True | XLOC_003118 |
| TCONS_00006169 | other | downstream | 803638 | 1522179 ~ 1529327 (+) | False | XLOC_003124 |
| TCONS_00006172 | other | downstream | 827576 | 1546117 ~ 1546231 (+) | True | XLOC_003126 |
| TCONS_00006199 | other | downstream | 1472080 | 2190621 ~ 2190730 (+) | True | XLOC_003138 |
| TCONS_00006215 | other | downstream | 1915250 | 2633791 ~ 2649394 (+) | False | XLOC_003150 |
