RNA id: TCONS_00062208


Basic Information

Item Value
RNA id TCONS_00062208
length 1254
RNA type mRNA
GC content 0.56
exon number 9
gene id XLOC_031745
representative True

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 475264 ~ 504283 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

ATGACATCAGAGGAGGAGGGGCCTGCTGCGGTGGGGGCAGAGCCTCAGGGCGAGCTGTGTGCTGCTTCGGGCTGGGATGGGCTTATTGAAGAAGAGGCGGAGCCTGTGGAACAGGAGGAGGCGGGGCCAGATGACGAGGCTGATGATGTCAGCAGTGGGTTTAGCGCTCTGGTGGTCCCGTATCCAGAACTGATGCCTATCGTCTTCTTCTGCCTCAAACAGACCACTTTTCCTCGCAGCTGGTGCATCCGCATGGTGTCCATGTGCTGCACATGGTTCGAGCGGGTCAGTATGCTGGTCATCCTCCTCAACTGTGTGACTTTAGGCATGTATCAGCCCTGTGAGAACATCAACTGCTCATCTGAGCGCTGTCAGGTCCTGCAGGCTTTTGACGCCTTCATCTACATCTTCTTTGCACTGGAGATGGTGGTGAAGATGCTGGCTCTGGGCATCTTCGGGCATCGCTGCTATCTGGGAGACACCTGGAACAGACTGGACTTCTTCATCGTGATGGCAGGggtgGTGGAGTATTCACTGGATGTGCAGGACATCAATCTGACGGCGATCCGGACGGTGCGAGTCCTGCGGCCGCTCAAAGCCATCAACAGAGTCCCCAGCATGAGGATCCTGGTGAACCTGCTGCTGGACACGCTGCCCATGCTGGGGAATGTGCTGCTGCTCTGCTTCTTCGTCTTCTTCATCTTCGGCATCATCGGCGTTCAGCTGTGGGCGGGACTCCTGCGAAACCGCTGCTACCCGGAGGAGAACTTCACACTTTCCAGTGGCGTGTCTCTTCCGGCTCCATACTACGCTCTGGATGTGGAGGACGAGCGGCCCTTCATCTGCTCTCTGCCGCAGGATAATGGCATCATGTCCTGCAGGGATGTGCCGACCCTGGGCATCCTGCTCGAACCCATGCACCATCAGGTCCCGGGGATCCTGCTCGAACCTGTGCCCAATGCTAGCGCCATCCCGCCCGGTCTGTGTGTGAACTGGCACCAGTACTACACTCGCTGCCAAACCGGACACAAAAACCCACACAAAGGAGCCATCAACTTCGACAACATCGGATACGCCTGGATCGTCATCTTTCAGgtcaTTACTCTGGAGGGCTGGGTGGAGATCATGTATTATGTGATGGATGCTCACTCCTTCTACAACTTCCTGTATTTTATTCTGAGGACTGGAACGTGGTGCTGTATAACGGTATGGCCTCCACGTCTCCTCTGGCCGCTCTGTATTTCGTGGCTCTGA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000193615

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00064768 lncRNA upstream 22227 445633 ~ 453037 (+) False XLOC_031744
TCONS_00062212 lncRNA downstream 90017 594300 ~ 597161 (+) True XLOC_031747
TCONS_00064769 lncRNA downstream 454974 959257 ~ 960829 (+) True XLOC_031750
TCONS_00064770 lncRNA downstream 559655 1063938 ~ 1065154 (+) False XLOC_031751
TCONS_00064596 lncRNA downstream 560636 1064919 ~ 1079773 (+) True XLOC_031751
TCONS_00064771 lncRNA downstream 781182 1285465 ~ 1285894 (+) True XLOC_031752
TCONS_00062207 mRNA upstream 65496 392815 ~ 409768 (+) True XLOC_031743
TCONS_00062206 mRNA upstream 100163 374875 ~ 375101 (+) True XLOC_031742
TCONS_00062205 mRNA upstream 100290 369991 ~ 374974 (+) False XLOC_031742
TCONS_00062204 mRNA upstream 133048 296130 ~ 342216 (+) True XLOC_031741
TCONS_00062203 mRNA upstream 202710 269204 ~ 272554 (+) True XLOC_031740
TCONS_00062209 mRNA downstream 10898 515181 ~ 533548 (+) False XLOC_031746
TCONS_00062210 mRNA downstream 14696 518979 ~ 543693 (+) True XLOC_031746
TCONS_00062211 mRNA downstream 80349 584632 ~ 598165 (+) False XLOC_031747
TCONS_00062213 mRNA downstream 94386 598669 ~ 599688 (+) True XLOC_031748
TCONS_00062215 mRNA downstream 108047 612330 ~ 627846 (+) False XLOC_031749
TCONS_00062191 other upstream 370542 103361 ~ 104722 (+) False XLOC_031731
TCONS_00062246 other downstream 2661325 3165608 ~ 3165722 (+) True XLOC_031773
TCONS_00062248 other downstream 2714080 3218363 ~ 3249470 (+) True XLOC_031772
TCONS_00062273 other downstream 3323494 3827777 ~ 3838228 (+) False XLOC_031788
TCONS_00062276 other downstream 3330159 3834442 ~ 3850242 (+) True XLOC_031788
TCONS_00062297 other downstream 5179898 5684181 ~ 5684295 (+) True XLOC_031803

Expression Profile

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