RNA id: TCONS_00064387


Basic Information

Item Value
RNA id TCONS_00064387
length 4824
RNA type mRNA
GC content 0.43
exon number 16
gene id XLOC_033132
representative False

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 46843592 ~ 46875310 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

CAAAAGTCCAAAATTaatagaacaataaaaaaaatgttcataaaatttTAGCTTCATTAAGCTTCAAAACTGAAATCTCTTTTAACTAAAAATGATAACATAAGAAGGCCATGTATCTGTTGTTATTGCAACAGTAGGCACAGTGGACACtctaatgtgtatgtgtgtatagagAAGGAACTCGGCCTCCTTATATGCGCATGCCAGTTTTACAGTGGCAAGTTTGTATGACTGTTTTATTTGATGGAAGCATTCCTGAGCGCTCCATCTCGCATTTTCAGACGCACAGGCATGTTCTGTGTGAAACTCAAAGCATCctaagtttttttcttttctttcttttctccaAACTCTAGTGACTTGCACATCTGGACTGATCGTATTCATCATCAAAGCACATGAATCAAACTATAACACCTGTACCGTGACAGTTCAGAATGAATACAAGCACCGCTACACAGCTAATTAATACACAAGCACTGAAAGTGAATGTGTGAAATAGCTCACTGGCCTCTAGTACTATTTTTGCTCAGGAAGTGCATGTGCTAAATGCCTCAGTAAATCTAGCCTCTGAGGTAGCTTTTGAAAATTTCGAAAGGGTATTTTTAACTTGCCTTTGCTTTCCTAACAGTACATTGAACACCTGAGCAACCTGAAACATATTGAAGTCAAGACGCCGGGATGTGCCGAATTTGAGTTTGAAATGGATCTCAAAGACCCCAATGCCAAAATCTTCCTCTTCAAGGATGGTGTTATGGTTCCATTTACCTTTGACACAGACGAGAAACACTCTCTGCGTCAAGTCGGCAGAAAATTCATCTTCAGTGTTAGCGGTCTGAATCCAGAGGATGCTGGATTGTATCAAGTCGATATTGAAGGAGTCAATGTTTTCTCCACTGACTTTAAAATTCCGGCGGCAGACTTCTTGGTAAAGATTCAGGAAGTGAAGGCCATAGAAAGACAGGATGCCGTGTTTGAGTGCCTCTTATCTGCTCCGCTCCCTAAGATATCCTGGCTAGGCAAGAACGTTCCTCTGGAACATGGCGAAAAGTATGATATCTCTGTTTCTGAAGACATGCTAATCCATAAACTGGTGGTGAAGGACTGTATGCAAGTGGACAAAGGAATCTACACAGCTGTGGCTGGTATGAAGTCTTGTAACGCCTGGCTGATAGTCGAAGCTGACCCAGATCCCAACCAGAGGGGCAAGAAAGCAGTACGCAAAACCACTCAAGCAGGTGGTGGAGGCGCAGATCTGATGAAGATTGCGGCGGAGCAGAGCGAGAAGCTGCAGAAGGAGCGTGATGAGAGGATGGAGAGGATTGAGAAGATGAAGCAGATCCAGGCTGAGGAAGAAGCTGCCAAAGAGGAAGAGAAACCAGCAGAAGAGCAACCTGCTGCACCAGAACCACACAAACCAAAGCCTAAACCTCAGCCTCAACCTCAAATTAAACAAGAATCTGAGGGTCCAATAGAGGAGCCAGAAGCTGAGCCCAAACCAGAGCCAGAGGTTAGGGAGGAAAAGCCAAAAACAGAGGAAGCTGCTCCACCTCAGGCAGAAGAAGAGCCAACGAAAGAGGAGCCAAGGAAAAGAGTGAGGACTGGGCCTTTAGTTCCAGACACTGTTATAGACCCAGGAGTTCACTTCACCAGTGGGCTGTCAGATGTTCATGCCATCATTGGTCAGACAGCTGAAATGGTCTGCAAACTCAGCAGTGAGAACTGTGATGGCATTTGGTATAAGGATGGAATAGAGATAACAGCAACAGATGATCTGAAGATTGTCAAAGATGGAGCAGTTCATAAAATTGTTGTATCAAACTGCACAGAGGATGACAATGGAAAGTACCGTTTTGAAGCAGATGGGCGTAAAACTGAGGCAATACTGGTTGTGGAGGACCCACCACGGATAAATCTAGAAGACTTGGCTAAATTCTCAGAGCCTGTGATAATCAAGGTTGGCCAAAATGCAACGTTTAAACTGGAGTTTGTAGGTCGTGAGCCAATGAAAATACAGTGGTACCAGGAGGGTGAGGAGATGCTTGAGGATAATCACATTAAGATTGAGAGGTCATCCATTCACAGTCGCCTTCTACTTGTGAAGTGCCAACGCAAAGACAGCGGAGAAATAAAGCTGAAGCTCAAAAATGAGTTTGGAACCATTGAAGCCCGATCAAAACTCATTGTAATAGATAAACCCACCAATCCAATGGGACCTGTTGATGTTATTGAAGCTTCATCCTCCTGCGTGGAGTTCAAGTGGAGGCCTCCAAAGGATGATGGCGGTTCCCCTATAATTAACTACTATTTGGAGCGCAACCAAATTGGACGCAACACCTGGATGAAAATTGGGAACATCCCAGGGGAGCCGCATTACAAGGACAATGATGTGGACCATGGAAGGAAATACTGCTATCGCATTAGAGCCTTGACTGCAGAGGGTACCAGTGATGTTTATGAAACTAGTGATATCCAGGCTGGCACCAAAGCATATCCTGGACAACCATCTACACCCAAAGTGGTGAGTGCCTTCAAGAACTGCATCACTTTGGCCTGGACACCTCCAACCAACACCGGTGGAACCAACATTGTCGGTTACAATATGGAGAAACGCAAAAGGGGCAGCAACTTATGGGGTCAAGTGAACCCTCCTGAAGAGCCAATCAAAGGCAAACAGTATGATGTGAAGGATGTTGTTGAAGGAATGGAATATGAATTTCGTGTGTCAGCCATCAATTTCTCTGGTGCTGGAGAACCAAGTGCACCATCTGAATTTGTGATAGCCAGAGATCCCAAAAAACCCCCTGGTAAAGTCATTGACCTGAAAGTTACAGATTCCACCTACAGTTCTTTGTCTCTGAGTTGGACTAAACCAAAGGAGGAGAAGGGCGTCCAGGATGAAGCTAAAGGTTATTTTGTGGAATTAAGGCCAGCTGAGAGCATAGACTGGGGTCGCTGCAACTCCAACCCACTTATTACAGCTTCTTACACAATTCTTGGCCTCAAGTCTATGGCTATGTATTGGGTCAGAGTAGTTGCAACCAATGAAGGTGGTGATGGAGAACCCAAGGATCTGGATAACTACATTATTGCCATGCCTCCACCTGTAAGGCCAAACTTCACCAACCGCAAAATGAAGAGTTTTATGGTTGTGAGAGCCGAAAATTCTGCTCGGGTCAACATAAACTTTGAGGCATCCCCAACACCAACTATAATCTGGCTGAAAGATGGAATGCCGGTGTCCAAACGAGTAAACATAAGCAATGCAGATGGGATGTCCCAACTCCTGATTGCTTCGGCGGAGCGTTCAGATTCTGGCATCTATTCCATTACTGTCAAGAACATGGTGGGTCAGGAAACGTTCAGTGTTGAGATCAGAGTGACAGATGATCCCAAACCCCCTGGCCCAGTGGAGCTGGAAGAAAATGTCCCTGGAACACTGACGGTCTCCTGGGAACCTTCATCTGATGAGAAACGAGATAATCACTTGCACTATATGGTGATGAAACGCGACTCTGTCAAACGAACCTGGCAGACAGTGGCTGACCGCTTATTCAACAATAACTTCACAGCAGTTAACATCACGCCAGGACGGGAATATAAATTCCGTGTGTATGCCAAAAATGACATAGGCCTCTCAGAACCATCCGAGTCCCTGAAATGGGGTGTTGTAAAGAAGAGAGAAAAGTTCATCCTCAACTTACCTCCATCAAAACCCTGCAACTTTGACTCCGCTCCCAATTTCACGGTGCCACTAAAGATGCACACAACCCCGGAGAAATATGAGTGCTACATGAGCTGTGCGGTGAAGGGCAATCCAAAGCCCCACGTCACCTGGTACCGCAATAACATCAGCCTGAACACCAACACCAACTACTACATTTCAAACACCTGCGGCGTCTGCTCCATGCTCATCTTAAGAGTCAGTGCCAAAGACAACGGAGAATACAAAGTAGTGGCAGAAAACTCTGTAGGCCGTGCTGAGTGTAGCACACAGCTGACGATCCTAGagTGAATTATCCGTGTGACTTCTGGAAGACTGTGGTGAATCATCTTCgatttataaatgtaaacataataaaaaaaaccttgaaaatgaaaaagaattaccaagcattttaaatgtatgaatttcaGCAGCTCAAGCTTCATTTCTATGCCAATTGAGCACACTATTTTGTTTGTCTTAAATATTGTATGCATTTTTTGTCATGTTACTATTCAGGGCTTTATTTTAACATCACTAATAAAAACAAGTGAATCAAATGTATGTAATGCCTTACTATTACTGTTCGCAAACTGGAAAGACATGTTTTGCAACAAATATTGGTCTCCAAATGTATCACATACCTTTATCTTTGAAGTGACCCCACCAGGACAAaggttaaaaacatttaaaagtgaaAACAACTAACATTTGCTCTTAAGAGCTAGTAAACCTGCTCGCAAATGTCAATGTAATGCAATAACTTTCCTTGTAAATTTCTGAAGTTGGTCATAAACCATGATCATAAAAATCCCTCCAACGTTCAACCATCAGAAACTGTTGATAATTACTCCCTTATAGTAAACTGCACCACCAAAAATCAGTGCAAAATATATCTGAGGCagttttcaaataaatgtaatcaaatgcaagaaataaatattttaaaaagcattaaagtgttttattttgttgtagcCCTGGCCTCAGTTCTTGCTTTACAGCTTTCCATTATTAACTTTCCCCTACAGGGACATAAGTATGTGCTAGTAGTAAACAGTGAAATGCATATACAGTAAACCTGGTGGCAGATATTTAGCTGTCCTGCTTGACCCGGT

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-131122-44 Orthologous to human IGFN1 (immunoglobulin like and fibronectin type III domain containing 1).

Ensembl:

ensembl_id ENSDART00000190148

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00064380 lncRNA downstream 272163 46568134 ~ 46571429 (-) True XLOC_033127
TCONS_00064373 lncRNA downstream 533581 46294361 ~ 46310011 (-) True XLOC_033123
TCONS_00064370 lncRNA downstream 681007 46102214 ~ 46162585 (-) True XLOC_033120
TCONS_00065222 lncRNA downstream 914417 45923942 ~ 45929175 (-) True XLOC_033118
TCONS_00064365 lncRNA downstream 964452 45875242 ~ 45879140 (-) True XLOC_033117
TCONS_00064398 lncRNA upstream 973677 47835353 ~ 47838372 (-) True XLOC_033139
TCONS_00065223 lncRNA upstream 1117629 47979305 ~ 48051590 (-) False XLOC_033141
TCONS_00064401 lncRNA upstream 1117629 47979305 ~ 48061524 (-) False XLOC_033141
TCONS_00064756 lncRNA upstream 1184610 48046286 ~ 48061659 (-) True XLOC_033141
TCONS_00065224 lncRNA upstream 2053192 48914868 ~ 48949493 (-) False XLOC_033149
TCONS_00064385 mRNA downstream 53550 46771853 ~ 46790042 (-) True XLOC_033131
TCONS_00064384 mRNA downstream 61416 46771654 ~ 46782176 (-) False XLOC_033131
TCONS_00064383 mRNA downstream 75552 46743246 ~ 46768040 (-) True XLOC_033130
TCONS_00064382 mRNA downstream 101137 46736251 ~ 46742455 (-) True XLOC_033129
TCONS_00064381 mRNA downstream 108212 46725540 ~ 46735380 (-) True XLOC_033128
TCONS_00064389 mRNA upstream 17213 46878889 ~ 46941245 (-) True XLOC_033133
TCONS_00064390 mRNA upstream 119810 46981486 ~ 47246948 (-) True XLOC_033134
TCONS_00064392 mRNA upstream 622408 47484084 ~ 47506351 (-) True XLOC_033136
TCONS_00064393 mRNA upstream 668205 47529881 ~ 47796989 (-) False XLOC_033137
TCONS_00064394 mRNA upstream 709595 47571271 ~ 47632398 (-) True XLOC_033137
TCONS_00064371 other downstream 591652 46168017 ~ 46251940 (-) True XLOC_033121
TCONS_00064372 other downstream 615360 46228117 ~ 46228232 (-) True XLOC_033122
TCONS_00064360 other downstream 2563378 44254721 ~ 44280214 (-) True XLOC_033114
TCONS_00064351 other downstream 2953130 43847860 ~ 43890462 (-) False XLOC_033109
TCONS_00064350 other downstream 2953160 43832025 ~ 43890432 (-) False XLOC_033109
TCONS_00064391 other upstream 294626 47156302 ~ 47156416 (-) True XLOC_033135
TCONS_00064395 other upstream 740923 47602599 ~ 47602715 (-) True XLOC_033138
TCONS_00064408 other upstream 1518569 48380245 ~ 48381223 (-) True XLOC_033145
TCONS_00064412 other upstream 1750358 48612034 ~ 48612150 (-) True XLOC_033148
TCONS_00064417 other upstream 2254343 49116019 ~ 49159094 (-) True XLOC_033153

Expression Profile

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