RNA id: TU124365



Basic Information


Item Value
RNA id TU124365
length 224
lncRNA type read_through
GC content 0.50
exon number 3
gene id G92348
representative True

Chromosome Information


Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 923305 ~ 984047 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


acacacactctctctctctctctctctctcacacacacacacacacacacacacacatacacacacacacacacacacacacacacacacacacacacacacagccacacacacacacacacacacacacacacacacagccacacacacagacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU124364 lncRNA downstream 29927 893136 ~ 893378 (-) True G92347
TU123891 lncRNA downstream 115113 800509 ~ 808192 (-) True G92039
TU123892 lncRNA downstream 115113 802873 ~ 808192 (-) False G92039
TU123890 lncRNA downstream 134809 786220 ~ 788496 (-) True G92038
TU123887 lncRNA downstream 140728 782360 ~ 782577 (-) True G92037
TU124375 lncRNA upstream 23684 1007731 ~ 1008403 (-) True G92354
TU124376 lncRNA upstream 24628 1008675 ~ 1009506 (-) True G92355
XR_005640287.1 lncRNA upstream 77084 1061131 ~ 1065922 (-) False LOC120565781
XR_005640284.1 lncRNA upstream 77084 1061131 ~ 1065918 (-) False LOC120565781
XR_005640285.1 lncRNA upstream 77084 1061131 ~ 1063761 (-) False LOC120565781
XM_039811447.1 mRNA downstream 95358 816580 ~ 827947 (-) True LOC120565559
XM_039811406.1 mRNA downstream 148066 763120 ~ 775239 (-) False LOC120565536
XM_039811405.1 mRNA downstream 148066 763120 ~ 775239 (-) True LOC120565536
XM_039811898.1 mRNA downstream 213092 708034 ~ 710213 (-) False LOC120565842
XM_039811448.1 mRNA upstream 44085 1028132 ~ 1050355 (-) True LOC120565560
XM_039812067.1 mRNA upstream 87871 1071918 ~ 1112572 (-) True LOC120565933
XM_039810239.1 mRNA upstream 140148 1124195 ~ 1125894 (-) True LOC120564968
XM_039811909.1 mRNA upstream 170101 1154148 ~ 1167566 (-) True LOC120565851
XM_039812173.1 mRNA upstream 184774 1168821 ~ 1186570 (-) True palm1a
TU123850 other downstream 238786 683959 ~ 684519 (-) True G92012
TU123830 other downstream 356584 553733 ~ 566721 (-) False LOC120565889
TU123743 other downstream 650639 178709 ~ 272666 (-) True G91938
TU123744 other downstream 650639 178709 ~ 272666 (-) False G91938
TU123726 other downstream 813110 109660 ~ 110195 (-) True G91929
TU124422 other upstream 119145 1103192 ~ 1129854 (-) False LOC120565934
TU124456 other upstream 252020 1236067 ~ 1240018 (-) False lrrc39
TU124458 other upstream 291885 1275932 ~ 1481460 (-) False G92415
TU124459 other upstream 414931 1398978 ~ 1440293 (-) True G92415
TU124510 other upstream 538444 1522491 ~ 1558418 (-) True G92437

Expression Profile