RNA id: TU185519


Basic Information

Item Value
RNA id TU185519
length 513
RNA type TUCP
GC content 0.54
exon number 2
gene id G137773
representative True

Chromosome Information

Item Value
chromosome id NC_053124.1
NCBI id CM020921.1
chromosome length 39224300
location 30921166 ~ 30936857 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

TCTGCGTCGCCGTGCAGGATGCGCGCATGAAGGTACCGGGCGGGCATCGGTCGCACTCCAGCGAGCCGCCGGTGATCGGGTCCGTGACCCTGAAGGTGAGGAGCGGCGCGGCGACGCCGATGACCAGAGCAACGTGCGCCGACAGCAGCGCCAGCGAGAAAAGCGACGCCAACATCTGGAAGGTCACAGGAGGAGAGACAGGAAATGAGAGAAGGAAATCCTCTGGAAACACAGTGTTATACGAGGAGTCACAGGGAATGTGAAGACACGACGAGATGCAGCGAAGTTTAACAAAAGGAAAACATGGAGAAATACGGCAAAACAACAAGGGAATACAACACGCGCAAACTGATGTCACACCTGGAACAGGTGTATCCTGTTTTTCAAACGGCACACAGCCCTTCACCGGATGTCCCTTTGGTATCGATTGGTCCCTGCAGCTGATCGGATGGGCCTGTAAAAACAGTGGGTTACTATGGAAATCACCATTTACTGCAAAACATTCATAGTACC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU185520 lncRNA upstream 1415 30916067 ~ 30919751 (+) True G137774
TU185512 lncRNA upstream 55046 30865109 ~ 30866120 (+) True G137766
TU185511 lncRNA upstream 56169 30864724 ~ 30864997 (+) True G137765
TU185467 lncRNA upstream 174158 30745785 ~ 30747008 (+) False G137743
TU185468 lncRNA upstream 174158 30745785 ~ 30747008 (+) True G137743
TU185522 lncRNA downstream 168 30937025 ~ 30939985 (+) True G137775
TU185525 lncRNA downstream 4504 30941361 ~ 30941841 (+) True G137777
TU185551 lncRNA downstream 61429 30998286 ~ 30998544 (+) True G137802
TU185554 lncRNA downstream 67397 31004254 ~ 31006914 (+) True G137805
TU185582 lncRNA downstream 333237 31270094 ~ 31270497 (+) True G137831
XM_039820007.1 mRNA upstream 285193 30591473 ~ 30635973 (+) True tmem65
XM_039820702.1 mRNA upstream 333230 30571463 ~ 30587936 (+) True rnf139
XM_039820929.1 mRNA upstream 351641 30555292 ~ 30569525 (+) True tatdn1
XM_039819221.1 mRNA upstream 372339 30536352 ~ 30548827 (+) False LOC120570731
XM_039820533.1 mRNA downstream 166959 31103816 ~ 31110425 (+) True LOC120571534
XM_039820534.1 mRNA downstream 182932 31119789 ~ 31166090 (+) True si:ch211-264f5.6
XM_039820749.1 mRNA downstream 531268 31468125 ~ 31471167 (+) True LOC120571681
XM_039819350.1 mRNA downstream 862251 31799108 ~ 31801682 (+) True LOC120570797
XM_039820763.1 mRNA downstream 924088 31860945 ~ 31870388 (+) True LOC120571697
TU185466 other upstream 174158 30745785 ~ 30747008 (+) False G137743
TU185469 other upstream 174158 30745785 ~ 30747008 (+) False G137743
unassigned_transcript_626 other upstream 403276 30516558 ~ 30517890 (+) True LOC120570927
TU185363 other upstream 403350 30516583 ~ 30517816 (+) False LOC120570927
TU185192 other upstream 766051 30151619 ~ 30155115 (+) True G137551
TU185622 other downstream 680738 31617595 ~ 31683452 (+) False LOC120570800
TU185625 other downstream 680738 31617595 ~ 31683452 (+) False LOC120570800
TU185629 other downstream 680738 31617595 ~ 31683452 (+) False LOC120570800
TU185635 other downstream 680738 31617595 ~ 31642463 (+) False LOC120570800
XR_005641241.1 other downstream 1058144 31995001 ~ 32003680 (+) True LOC120571558

Expression Profile