RNA id: TU199989


Basic Information

Item Value
RNA id TU199989
length 234
lncRNA type sense_over
GC content 0.44
exon number 2
gene id G147963
representative False

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 31580132 ~ 31737438 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

GTTGGATTCAAGCGTCCATCACTGTATAAGAGGACGGTATCTGGCTTCAGGTCAGGTCTGCTCCACTCTACAGCTATGATGGAGGGATCAGCAGCCTGACATGGTAGAATGGCATCATCTCCAGGGTGCACTGTTAACAAAATcaggtctgaaaaacaacaataaactacTATTAATAATAAGAAGTCATGTTATTTCAACAGTTGTCTCCAGGTGTGTCCCTGCAGAAGGTCT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU199956 lncRNA upstream 111846 31435850 ~ 31468286 (+) False G147932
TU199955 lncRNA upstream 111846 31458088 ~ 31468286 (+) True G147932
TU199922 lncRNA upstream 178999 31395435 ~ 31401133 (+) True G147919
XR_005641579.1 lncRNA upstream 230023 31340488 ~ 31350109 (+) True LOC120573004
TU199872 lncRNA upstream 256851 31320652 ~ 31323281 (+) True G147872
XR_005641623.1 lncRNA downstream 29762 31765475 ~ 31767761 (+) True LOC120573052
TU200018 lncRNA downstream 33606 31769319 ~ 31844752 (+) False G147982
TU200020 lncRNA downstream 101460 31837173 ~ 31861532 (+) True LOC120573014
XR_005641588.1 lncRNA downstream 124138 31859851 ~ 31872085 (+) False LOC120573014
TU200046 lncRNA downstream 196462 31932175 ~ 31948837 (+) True G148005
XM_039822217.1 mRNA upstream 41239 31524250 ~ 31538893 (+) True LOC120572782
XM_039822463.1 mRNA upstream 92145 31480688 ~ 31487987 (+) True LOC120572933
XM_039822464.1 mRNA upstream 92145 31480688 ~ 31487987 (+) False LOC120572933
XM_039822300.1 mRNA upstream 400448 31129731 ~ 31179684 (+) True LOC120572828
XM_039822428.1 mRNA upstream 461878 31115360 ~ 31118254 (+) False LOC120572908
XM_039822373.1 mRNA downstream 32241 31767954 ~ 31790030 (+) True LOC120572865
XM_039822372.1 mRNA downstream 32241 31767954 ~ 31790030 (+) False LOC120572865
XM_039822430.1 mRNA downstream 250183 31985896 ~ 31989525 (+) True LOC120572911
XM_039822298.1 mRNA downstream 262548 31998261 ~ 32046440 (+) False LOC120572827
XM_039822299.1 mRNA downstream 262620 31998333 ~ 32046440 (+) True LOC120572827
XR_005641511.1 other upstream 92145 31479201 ~ 31487987 (+) False LOC120572933
XR_005641512.1 other upstream 92145 31480688 ~ 31487987 (+) False LOC120572933
XR_005641513.1 other upstream 92145 31480688 ~ 31487987 (+) False LOC120572933
XR_005641514.1 other upstream 99652 31479193 ~ 31480480 (+) False LOC120572933
TU199826 other upstream 353004 31226709 ~ 31227128 (+) True G147831
TU200151 other downstream 887181 32622894 ~ 32698317 (+) False G148079
TU199900 other downstream 968035 32703748 ~ 32720876 (+) True LOC120572879
TU199912 other downstream 1212701 32948414 ~ 32951917 (+) False LOC120572610
TU200253 other downstream 1503386 33239099 ~ 33285193 (+) False G148151
TU200990 other downstream 1992658 33728371 ~ 33864241 (+) False LOC120573051

Expression Profile