RNA id: TU200641



Basic Information


Item Value
RNA id TU200641
length 316
lncRNA type intronic
GC content 0.48
exon number 2
gene id G148407
representative True

Chromosome Information


Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 32323453 ~ 32323850 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


gcagtcagtaggagagagtagcagtcagtaggagagagtagcagtcagtagaggagagagtagcagtcagtaggagagagcagcagtcagtaggagagagcagcagtcagtaggagagagtagcagtcagtaggagagagtagcagtcagtagaggagagagtagcagtcagtaggagagagcagcagtcagtagaggagagagtagcagtcagtaggggagagccaaaccaaaacttaccggatcaaatgtatacaatgtaacaaaaacatgaactttGGTCCAGACCTGGGTTcagactttcatgtgtgaaaac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU200631 lncRNA downstream 76626 32245361 ~ 32246827 (-) True G148398
TU200618 lncRNA downstream 161922 32141815 ~ 32161531 (-) False LOC120572607
TU200620 lncRNA downstream 161922 32141815 ~ 32161531 (-) False LOC120572607
TU200609 lncRNA downstream 185055 32057882 ~ 32138398 (-) True G148386
TU200605 lncRNA downstream 219995 32041106 ~ 32103458 (-) True G148383
TU200526 lncRNA upstream 11132 32334982 ~ 32339504 (-) True G148315
TU200645 lncRNA upstream 32608 32356458 ~ 32357149 (-) True G148409
XR_005641630.1 lncRNA upstream 64977 32388827 ~ 32392208 (-) True LOC120573058
TU200520 lncRNA upstream 169134 32492984 ~ 32493804 (-) True G148310
TU200654 lncRNA upstream 182710 32506560 ~ 32517535 (-) True G148416
XM_039822251.1 mRNA downstream 649829 31277977 ~ 31673624 (-) True LOC120572802
XM_039822162.1 mRNA downstream 699640 31435815 ~ 31623813 (-) False LOC120572747
XM_039822159.1 mRNA downstream 699640 31435815 ~ 31623813 (-) True LOC120572747
XM_039822160.1 mRNA downstream 699640 31435815 ~ 31623813 (-) False LOC120572747
XM_039822161.1 mRNA downstream 699641 31435815 ~ 31623812 (-) False LOC120572747
XM_039822253.1 mRNA upstream 57903 32381753 ~ 32419579 (-) True LOC120572803
XM_039822254.1 mRNA upstream 85493 32409343 ~ 32419579 (-) False LOC120572803
XM_039822256.1 mRNA upstream 116798 32440648 ~ 32448330 (-) True LOC120572804
XM_039822255.1 mRNA upstream 117305 32441155 ~ 32448330 (-) False LOC120572804
XM_039822257.1 mRNA upstream 120078 32443928 ~ 32448330 (-) False LOC120572804
TU200566 other downstream 156078 32163056 ~ 32167375 (-) False LOC120572607
TU200397 other downstream 585771 31717372 ~ 31737682 (-) False G148246
TU200398 other downstream 714967 31607051 ~ 31608486 (-) False G148246
TU199667 other downstream 1492133 30829970 ~ 30831320 (-) False LOC120572603
TU199644 other downstream 1646456 30675187 ~ 30676997 (-) False G147699
TU200650 other upstream 49228 32373078 ~ 32375549 (-) False LOC120572607
TU200707 other upstream 374471 32698321 ~ 32700405 (-) True G148453
TU200744 other upstream 407230 32731080 ~ 32755361 (-) True G148472
TU200833 other upstream 621495 32945345 ~ 32945806 (-) True G148536
TU200787 other upstream 629920 32953770 ~ 32957919 (-) False G148509

Expression Profile