RNA id: TU204375


Basic Information

Item Value
RNA id TU204375
length 223
lncRNA type inter_gene
GC content 0.53
exon number 2
gene id G150942
representative True

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 2069793 ~ 2070711 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

cacaacatgctaaccggcaacataggattccattcactacgctaagctaactagcggtggcgctgccggtgttgcaccggactaaaacgatgcatgcacaaaaaatgcgttggcccacctatctacagctagaggagaccccacctatctacagctaggggagaccccacctatctacagctagaggagaccccacctatctacagctaggggagaccgtgat

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU204371 lncRNA upstream 10321 2058960 ~ 2059472 (+) True G150940
TU204312 lncRNA upstream 47515 2003422 ~ 2022278 (+) True G150902
TU204302 lncRNA upstream 54725 1971041 ~ 2015068 (+) True G150894
TU204301 lncRNA upstream 56084 2013443 ~ 2013709 (+) True G150893
TU204356 lncRNA upstream 60681 2008717 ~ 2009112 (+) False G150926
TU204384 lncRNA downstream 23497 2094208 ~ 2094815 (+) True G150947
TU204383 lncRNA downstream 23725 2094436 ~ 2094815 (+) False G150947
TU204386 lncRNA downstream 50626 2121337 ~ 2121669 (+) True G150948
TU204387 lncRNA downstream 50626 2121337 ~ 2121669 (+) False G150948
TU204399 lncRNA downstream 74621 2145332 ~ 2147026 (+) True G150958
XM_039823746.1 mRNA upstream 293222 1769076 ~ 1776571 (+) False LOC120573865
XM_039823745.1 mRNA upstream 293224 1769076 ~ 1776569 (+) False LOC120573865
XM_039823747.1 mRNA upstream 294499 1767641 ~ 1775294 (+) True LOC120573865
XM_039825098.1 mRNA upstream 571693 1485594 ~ 1498100 (+) True jmjd8
XM_039823695.1 mRNA upstream 649895 1402982 ~ 1419898 (+) True LOC120573834
XM_039825806.1 mRNA downstream 20766 2091477 ~ 2119123 (+) True LOC120575157
XM_039823730.1 mRNA downstream 383039 2453750 ~ 2459249 (+) True trappc5
XM_039825281.1 mRNA downstream 390532 2461243 ~ 2493919 (+) True LOC120574835
XM_039825282.1 mRNA downstream 390532 2461243 ~ 2493919 (+) False LOC120574835
XM_039824508.1 mRNA downstream 450004 2520715 ~ 2581298 (+) True wu:fb95e10
TU204330 other upstream 2145 1936920 ~ 2067648 (+) True G150905
TU204182 other upstream 300899 1761280 ~ 1768894 (+) True G150804
TU203548 other upstream 744693 1324062 ~ 1325100 (+) False G150386
TU203550 other upstream 744693 1324062 ~ 1325100 (+) True G150386
TU203663 other upstream 769035 1295618 ~ 1300758 (+) True G150465
TU204401 other downstream 78020 2148731 ~ 2164361 (+) True G150960
TU204402 other downstream 78020 2148731 ~ 2216999 (+) False G150960
TU204406 other downstream 78020 2148731 ~ 2154848 (+) False G150960
TU204407 other downstream 78020 2148731 ~ 2164361 (+) False G150960
TU204409 other downstream 78020 2148731 ~ 2216999 (+) False G150960

Expression Profile