RNA id: TU204688



Basic Information


Item Value
RNA id TU204688
length 346
lncRNA type intronic
GC content 0.52
exon number 2
gene id G151112
representative True

Chromosome Information


Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 2728744 ~ 2729495 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


agcagagtatgagggcgtgccctgacagtacctaggtaaggactactagccagtcagaagcagagtatgagggcgtaccctgacagtacctaggtaaggactactagccaatcagaagcagagtatgagggtgtgccctgacagtacctaggtaaggactactagccagtcagaagcagagtatgagggcgtgccctgacagtacctaggtaaggactactagccagtcagaagcagagtatgagggcgtgccctgacagtacctaggtaaggactactagccaatcagaagcagagtatgagggcgtgccctgacagtacctaggtaaggactactagccagtca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU204674 lncRNA upstream 35975 2617916 ~ 2692769 (+) False G151104
TU204672 lncRNA upstream 35975 2691637 ~ 2692769 (+) False G151104
TU204673 lncRNA upstream 35975 2691637 ~ 2692769 (+) True G151104
TU204675 lncRNA upstream 35975 2691637 ~ 2692769 (+) False G151104
TU204612 lncRNA upstream 84608 2399900 ~ 2644136 (+) True G151077
TU204721 lncRNA downstream 207989 2937484 ~ 2944611 (+) False G151130
TU204726 lncRNA downstream 211114 2940609 ~ 2941036 (+) True G151131
TU204724 lncRNA downstream 212765 2942260 ~ 2944611 (+) True G151130
TU204940 lncRNA downstream 267614 2997109 ~ 2997374 (+) True G151243
TU204941 lncRNA downstream 268562 2998057 ~ 2998259 (+) True G151244
XM_039824139.1 mRNA upstream 37184 2645826 ~ 2691560 (+) True LOC120574078
XM_039824508.1 mRNA upstream 147446 2520715 ~ 2581298 (+) True wu:fb95e10
XM_039824509.1 mRNA upstream 147446 2528840 ~ 2581298 (+) False wu:fb95e10
XM_039825281.1 mRNA upstream 234825 2461243 ~ 2493919 (+) True LOC120574835
XM_039825981.1 mRNA downstream 40874 2770369 ~ 2783645 (+) True si:ch211-106h11.1
XM_039824002.1 mRNA downstream 58120 2787615 ~ 2798867 (+) True ddx39ab
XM_039824005.1 mRNA downstream 114085 2843580 ~ 2861069 (+) True txn2
XM_039824161.1 mRNA downstream 144460 2873955 ~ 2928197 (+) True LOC120574089
XM_039824162.1 mRNA downstream 144460 2873955 ~ 2928197 (+) False LOC120574089
TU204669 other upstream 37182 2689720 ~ 2691562 (+) False LOC120574078
TU204682 other upstream 39706 2685103 ~ 2689038 (+) False LOC120574078
TU204409 other upstream 511745 2148731 ~ 2216999 (+) False G150960
TU204708 other downstream 69974 2799469 ~ 2802221 (+) True G151122
TU204936 other downstream 272404 3001899 ~ 3003364 (+) True G151240
TU205031 other downstream 417009 3146504 ~ 3147977 (+) True G151315
XR_005642000.1 other downstream 651792 3381287 ~ 3381386 (+) True LOC120575509
XR_005642001.1 other downstream 653019 3382514 ~ 3382613 (+) True LOC120575510

Expression Profile