RNA id: TU206520



Basic Information


Item Value
RNA id TU206520
length 417
lncRNA type inter_gene
GC content 0.38
exon number 2
gene id G152441
representative False

Chromosome Information


Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 6182408 ~ 6228114 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


GTGAGTCAGTGTTCTGGagtcgtttttattttttactcattttatttaattttttcacaGCTTgacctctttcttcttttggtATGTTTTACAACAACTCATTACCAGAGGATAAagggatggatagatagatggatggatggatggggtGATggtgtgagagggagagagggaggggggcgaATGCAGGAAGGGAAGAGTGCCGTGCAGAGGgaagagaaaacagaaaaaaagggagaaacaaATTGAGGAAGTGTTGGCTAAGACGGTGAAGTCAGAAATACAGAAGGACATTAGAGTCTTCCTCTTATAATCTCTATTTTTCTTTAACAATCTACTTGAAATGCTTTAAAATGTGAGGTTTATTCCTGCAGACATGTTTTATATCTATACATGAACAGAAAATAGAACAGTTTG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU206523 lncRNA downstream 17626 6182408 ~ 6209012 (-) False G152441
TU206490 lncRNA downstream 71538 6154874 ~ 6155100 (-) True G152422
TU206482 lncRNA downstream 77826 6146825 ~ 6148812 (-) True G152414
TU206473 lncRNA downstream 105971 6120448 ~ 6120667 (-) True G152406
TU206470 lncRNA downstream 114703 6111732 ~ 6111935 (-) True G152403
TU206554 lncRNA upstream 84698 6312812 ~ 6313399 (-) True G152462
TU206578 lncRNA upstream 110559 6338673 ~ 6339107 (-) True G152473
TU206601 lncRNA upstream 130955 6359069 ~ 6359288 (-) True G152492
TU206603 lncRNA upstream 149845 6377959 ~ 6378253 (-) True G152494
TU206604 lncRNA upstream 152761 6380875 ~ 6381191 (-) True G152495
XM_039823671.1 mRNA downstream 57614 6155299 ~ 6169024 (-) True csf2rb
XM_039823670.1 mRNA downstream 57620 6155299 ~ 6169018 (-) False csf2rb
XM_039823673.1 mRNA downstream 57620 6155299 ~ 6169018 (-) False csf2rb
XM_039823669.1 mRNA downstream 57620 6155299 ~ 6169018 (-) False csf2rb
XM_039826322.1 mRNA downstream 144674 6073542 ~ 6081964 (-) False si:dkey-110g7.8
XM_039823846.1 mRNA upstream 1249 6229363 ~ 6244419 (-) True baiap2l2a
XM_039824585.1 mRNA upstream 117206 6345320 ~ 6350264 (-) True ccdc97
XM_039825759.1 mRNA upstream 348030 6576144 ~ 6585025 (-) True desi1a
XM_039824026.1 mRNA upstream 379170 6607284 ~ 6649259 (-) True llgl1
XM_039824028.1 mRNA upstream 422715 6650829 ~ 6698387 (-) True myo15aa
TU206279 other downstream 612970 5574680 ~ 5613668 (-) False atp5mf
TU206278 other downstream 612970 5610556 ~ 5613668 (-) False atp5mf
TU206260 other downstream 643777 5580368 ~ 5582861 (-) False bud31
TU206270 other downstream 672388 5549318 ~ 5554250 (-) False top3a
TU206084 other downstream 762220 5461846 ~ 5464418 (-) True G152114
TU206683 other upstream 491670 6719784 ~ 6720643 (-) True G152567
XR_005641918.1 other upstream 1854024 8082138 ~ 8100398 (-) False LOC120574885
TU207167 other upstream 2213065 8441179 ~ 8444381 (-) True G152952
TU207482 other upstream 2503283 8731397 ~ 8733019 (-) True G153172
TU207525 other upstream 2584228 8812342 ~ 8816276 (-) False natd1

Expression Profile