RNA id: TU206603



Basic Information


Item Value
RNA id TU206603
length 295
lncRNA type inter_gene
GC content 0.51
exon number 1
gene id G152494
representative True

Chromosome Information


Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 6377959 ~ 6378253 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


TAGGAGATGGGATGCTGCTCTCAGCCAGCGTCTCAGGTGGGGAGGGCAGAGGAAGCAGGCCCAGAGGAGACTCCTGGCCCATCAGCTGTTCTGGAGACAGACTGTAAATGCTGTCCTCATCACACGATGAGTTATCACCTGAAGCCTTTGGAAACCGTGTCTCtaagaaggagaggagggaggaaatgGTTGATCTCTAGGCAGATGAAAACGTAATGcaacttgtttttttccccgTAACAAAGGAAACACCTACTGAATATGTATCCCCTGCCTTGCAGGGCCAcgactagag

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU206601 lncRNA downstream 18671 6359069 ~ 6359288 (-) True G152492
TU206578 lncRNA downstream 38852 6338673 ~ 6339107 (-) True G152473
TU206554 lncRNA downstream 64560 6312812 ~ 6313399 (-) True G152462
TU206520 lncRNA downstream 149845 6226638 ~ 6228114 (-) False G152441
TU206523 lncRNA downstream 168947 6182408 ~ 6209012 (-) False G152441
TU206604 lncRNA upstream 2622 6380875 ~ 6381191 (-) True G152495
TU206606 lncRNA upstream 8912 6387165 ~ 6391598 (-) True G152497
TU206660 lncRNA upstream 49075 6427328 ~ 6428236 (-) True G152548
TU206672 lncRNA upstream 219101 6597354 ~ 6597843 (-) True G152559
TU206674 lncRNA upstream 219746 6597999 ~ 6598876 (-) True G152560
XM_039824585.1 mRNA downstream 27695 6345320 ~ 6350264 (-) True ccdc97
XM_039823846.1 mRNA downstream 133540 6229363 ~ 6244419 (-) True baiap2l2a
XM_039823670.1 mRNA downstream 208941 6155299 ~ 6169018 (-) False csf2rb
XM_039825759.1 mRNA upstream 197891 6576144 ~ 6585025 (-) True desi1a
XM_039824026.1 mRNA upstream 229031 6607284 ~ 6649259 (-) True llgl1
XM_039824028.1 mRNA upstream 272576 6650829 ~ 6698387 (-) True myo15aa
XM_039825833.1 mRNA upstream 333371 6711624 ~ 6718897 (-) True drg2
XM_039825832.1 mRNA upstream 333371 6711624 ~ 6718893 (-) False drg2
TU206522 other downstream 149845 6182408 ~ 6228114 (-) True G152441
TU206279 other downstream 764291 5574680 ~ 5613668 (-) False atp5mf
TU206278 other downstream 764291 5610556 ~ 5613668 (-) False atp5mf
TU206260 other downstream 795098 5580368 ~ 5582861 (-) False bud31
TU206270 other downstream 823709 5549318 ~ 5554250 (-) False top3a
TU206683 other upstream 341531 6719784 ~ 6720643 (-) True G152567
XR_005641918.1 other upstream 1703885 8082138 ~ 8100398 (-) False LOC120574885
TU207167 other upstream 2062926 8441179 ~ 8444381 (-) True G152952
TU207482 other upstream 2353144 8731397 ~ 8733019 (-) True G153172
TU207525 other upstream 2434089 8812342 ~ 8816276 (-) False natd1

Expression Profile