RNA id: XM_039823846.1


Basic Information

Item Value
RNA id XM_039823846.1
length 1895
RNA type mRNA
GC content 0.48
exon number 14
gene id baiap2l2a
representative True

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 6229363 ~ 6244419 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

GGTGTCAGTTACTTACACACTGCCTCCTCTCCTCAGCTCCACGTCCACTTTAATACTATTAACTCTTTTCTCACAGAGGCGTTGGCACATTTGCTGGATGATTTAAGACCCGCAGACCCTCTTGAGGTTTCACTGACAGTTGCACTGTTCTGGATATAAACATGTCGGGGATGAATAGCGATCAGCTGCATCGGTCCACCTTGGGGATTTACTCTAGCTTGATGGACGAGTTCAACCCAAGCCTACAGAAACTGGTTTTACTGGGTAACAGATACGTCCAAGCCTTCCAGGctctTGCTCTGACAAGTGAGGCCTACTTCAGTGCACTTTCAAAGATTGGAGAAAGGGCTTTTCACACCACATCCTCCCGCTTGCTAGGAGACGTCCTGATTCAGATCTCTGAGAGCCAAAGGAGACTCACCGGGGAGCTGGATGGAGTATTCTGCAGGTTCAGTATGGAGGTTCTTCAGGAGATGGACAATAACATCAGACTGGACAGAGACTACATATCAGGCAGCAGGAAGCATTATGAAATGGAAGTCCACAACCAGGCAGCAGCTCTGGAGAGACAGCTGAGGAGAGGAGCCAACcagGATTGTAGTGAGTATTTGCAGTTCCTCAGGGAGAGCCACGCCGAGGCtctgaaggaggaggagaggcgaTACCGCTTCCTGTCTGAGAAACACTGCGCCCTGATACAATCCATCGCCCACCTCATGAATAAGGCAGGAGGTCCCCTCCAGCAGCGAGCTGATGCCTGGACGGTGGACACGGATGCCACCAGAGCACCTGAGGTCCGACGACCCACTTCATTGGACAACTCTGTGGggatgagggaggaggagatgagAAAGAGCAGAGAGGCACTGCCCCTCGGCAACATACCATCAAGGGCGCCGTCTCCCCAGGGAAGCATTTCTCGCTCTTCAGGAGGCCGATACATGAGGGCCAGGGTGGCCCACCAGCCTGGTGGCTCCAACCAAACCCTGCTGCCCTTCACCAGGGGAGAGATGATTACCGTGCTGGTCAAACAGCCCAAGAACGGCTGGCTGTTCGGACGTGCTGAAAGCAGTTCACGTCAGGGATGGTTTCCAGCTACCTATGTGGAAGCAATGGATGATCCTCCAATGACAATCAGTTCTGGGAGCTCCTCTCTgcgaagcagcagcagcatgagcAACCTACTGGACCAACCAGTAGCCCCGCCCCCTCCGCCTCCACCACCTCTGTCTTCAAATAAACAGAATGAGATGCGACCAATCACACTGACTCCTGACAAAAGGGCTGAGTCTTATTCAGAAAACAAGAGATCAAAACCTGATGGATCACAACCAGAACTCTTCCCAAAgggtACCAACCCATTTGCCACTGTTAAGCTGAGACCCACGTCCACCAATGACAGATCGGCCCCACGTGTATATCGATGATGACACCTCAACCCTGACAACAAATGCTTTCGTTGAGCTCGACAGTTCATTCTTGACTTTGGAAATAGCAGAGTATATATGGTCGAAAGTGAGTAAGTGGGCCTTGCGTGAATGCTTTTCATACTTTGTCATACAACACTCAGTTTGCCATAGATACACACAAAGCTggagaaagaagacaaaaataaatggactgtatatatatatatatatatttgtcttGGTAAACTAACAACCAACATTGTGTTTCTTTAGGTAGTAATGGTTTTGTCCTTGTTGACTTTTCATAATTGGCTTTAACATTTGTAAAATGGTAAGAATTAATCCCTGTTGCAAATGTGTTTATGTAACATAAACTAATATGTGCAATGAGCTGGTTTAAATCATCATTCCTTCTTTGATTTATTGGCACTGAAATTCGGACGGAAGAGATGACATGTGACTTTGGAAATAAATGATTACTGTCTA

Function

GO:

id name namespace
GO:0050794 regulation of cellular process biological_process
GO:0016043 cellular component organization biological_process
GO:0005515 protein binding molecular_function

KEGG:

id description
K23645 BAIAP2L2; BAI1-associated protein 2-like protein 2

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU206520 lncRNA downstream 1249 6226638 ~ 6228114 (-) False G152441
TU206523 lncRNA downstream 20351 6182408 ~ 6209012 (-) False G152441
TU206490 lncRNA downstream 74263 6154874 ~ 6155100 (-) True G152422
TU206482 lncRNA downstream 80551 6146825 ~ 6148812 (-) True G152414
TU206473 lncRNA downstream 108696 6120448 ~ 6120667 (-) True G152406
TU206554 lncRNA upstream 68393 6312812 ~ 6313399 (-) True G152462
TU206578 lncRNA upstream 94254 6338673 ~ 6339107 (-) True G152473
TU206601 lncRNA upstream 114650 6359069 ~ 6359288 (-) True G152492
TU206603 lncRNA upstream 133540 6377959 ~ 6378253 (-) True G152494
TU206604 lncRNA upstream 136456 6380875 ~ 6381191 (-) True G152495
XM_039823671.1 mRNA downstream 60339 6155299 ~ 6169024 (-) True csf2rb
XM_039823670.1 mRNA downstream 60345 6155299 ~ 6169018 (-) False csf2rb
XM_039823673.1 mRNA downstream 60345 6155299 ~ 6169018 (-) False csf2rb
XM_039823669.1 mRNA downstream 60345 6155299 ~ 6169018 (-) False csf2rb
XM_039826322.1 mRNA downstream 147399 6073542 ~ 6081964 (-) False si:dkey-110g7.8
XM_039824585.1 mRNA upstream 100901 6345320 ~ 6350264 (-) True ccdc97
XM_039825759.1 mRNA upstream 331725 6576144 ~ 6585025 (-) True desi1a
XM_039824026.1 mRNA upstream 362865 6607284 ~ 6649259 (-) True llgl1
XM_039824028.1 mRNA upstream 406410 6650829 ~ 6698387 (-) True myo15aa
XM_039825833.1 mRNA upstream 467205 6711624 ~ 6718897 (-) True drg2
TU206522 other downstream 1249 6182408 ~ 6228114 (-) True G152441
TU206279 other downstream 615695 5574680 ~ 5613668 (-) False atp5mf
TU206278 other downstream 615695 5610556 ~ 5613668 (-) False atp5mf
TU206260 other downstream 646502 5580368 ~ 5582861 (-) False bud31
TU206270 other downstream 675113 5549318 ~ 5554250 (-) False top3a
TU206683 other upstream 475365 6719784 ~ 6720643 (-) True G152567
XR_005641918.1 other upstream 1837719 8082138 ~ 8100398 (-) False LOC120574885
TU207167 other upstream 2196760 8441179 ~ 8444381 (-) True G152952
TU207482 other upstream 2486978 8731397 ~ 8733019 (-) True G153172
TU207525 other upstream 2567923 8812342 ~ 8816276 (-) False natd1

Expression Profile