RNA id: XM_039825833.1


Basic Information

Item Value
RNA id XM_039825833.1
length 1534
RNA type mRNA
GC content 0.47
exon number 14
gene id drg2
representative True

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 6711624 ~ 6718897 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

TATTTGCGTTACACTGAGTTCCCTTGTTTCTTCCGGACTTTTTATGGGCACGGAACGAGTTCCGGTTGGTGGTGTCAGTCATCTGTGCATGCCgcgcagtgtttcctctgtcaAAGTCAGTAGCTGTAGCACACCTGGACCGCAACAATGGGGATCTTGGAGAAAATCGcggaaatagagagagaaatCGCCCggacacagaaaaacaaagCCACTGAGTACCATCTGGGTTTGCTCAAGGCCAAGCTAGCCAAGTACAGAGCTCAGCTCCTGGAGCCCACCAAGTCAGCGGGGGCCAAAGGCGAGGGCTTTGATGTCATGAAATCAGGGGATGCTCGTGTTGCTCTTATCGGTTTCCCCTCCGTGGGTAAGTCCACCTTCCTTAGTTTGATGACATCAACAGCCAGTGAAGCTGCTTCCTATGAGTTCACCACTCTCACCTGCATACCTGGTGTCATAGAGTACAAAGGGGCCAACATCCAGTTGCTGGATCTGCCAGGAATCATTGAGGGTGCTGCCCAAGGCAAGGGTAGAGGTCGGCAGGTCATTGCTGTTGCCAGGACAGCAGACGTCGTCATCATGATGTTGGATGCCACCAAAGGAGATgttcagagAGAACTTCTAGAGAAGGAGTTGGAGACGGTGGGCATCAGACTCAACTGCTCAAAACCAAATATTTATTTCAAGCCCAAGAAAGGTGGCGGCCTATCCTACAACTCCACAGTTCCTCTCACCCACTGCTCGGAGAAGCTTGTTCAGCTCATCCTTCACGAATACAAAATCTTTAATGCAGAAGTCCTCTTCAGGGAGGACAGCACACCAGATGAGTTCATCGATGTCATCGTCGGGAACAGAGTTTACATGCCTTGCCTTTATGTGTACAATAAGGTGGATCAAATCTCCATCGAGGAGGTGAACCGCCTGGCTCACAGACCTAACAGTGTTGTCATCAGTTGTGGGATGAAGTTGAACCTGGATTACCTTCTGGAGAGTTTATGGGAATACCTAGCTCTGATTTGCATTTACACTAAGAAAAGAGGAgAGCGCCCAGACTTTAATGATGCAATCATTATGAGACGAGGAGCATCTGTAGAACACGTGTGCCATCGAATCCACAGAACCTTAGCCGGCCAGTTCAAATATGCCCTGGTTTGGGGAACCAGTACCAAGTACAGCCCCCAGAGGGTCGGCCTAACGCACATCATGGAGCACGAGGATGTCATCCAGATCGTTAAGAAGTAAAACACGGTCCTGATCGGACAGAGGAGCGACGGAGCAGGAGGAGTCCCGCTTTTCTCGGAGGagttaaaatggaaaaaaagaccCACTGTACAGTAGATATacagcaatgaaaaatgagccGCCATTCTTATTTTGTAtattaaaattaacaaaatgcatTGAAGAGACAGAGCAGACTTGAGTTGGCTGTGGACAGGAAATGGTATATTTTACCTTTTGATTATAAGAAGATACATTGATTGAGAGAGAAAACGGAGAGGAAAAGAATAAAGTCCATAAAATGTTTAATCAA

Function

GO:

id name namespace
GO:0005525 GTP binding molecular_function

KEGG:

id description
K06944 K06944; uncharacterized protein

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_005641813.1 lncRNA downstream 425 6709402 ~ 6711199 (-) True LOC120574035
TU206674 lncRNA downstream 112748 6597999 ~ 6598876 (-) True G152560
TU206672 lncRNA downstream 113781 6597354 ~ 6597843 (-) True G152559
TU206660 lncRNA downstream 283388 6427328 ~ 6428236 (-) True G152548
TU206606 lncRNA downstream 320026 6387165 ~ 6391598 (-) True G152497
TU206694 lncRNA upstream 37894 6756791 ~ 6757085 (-) True G152577
TU206823 lncRNA upstream 53983 6772880 ~ 6773713 (-) False arhgdig
TU206870 lncRNA upstream 294350 7013247 ~ 7013685 (-) True G152720
TU206859 lncRNA upstream 302572 7021469 ~ 7038559 (-) True G152712
TU206881 lncRNA upstream 481790 7200687 ~ 7200912 (-) True G152730
XM_039824028.1 mRNA downstream 13237 6650829 ~ 6698387 (-) True myo15aa
XM_039824026.1 mRNA downstream 62365 6607284 ~ 6649259 (-) True llgl1
XM_039825759.1 mRNA downstream 126599 6576144 ~ 6585025 (-) True desi1a
XM_039824585.1 mRNA downstream 361360 6345320 ~ 6350264 (-) True ccdc97
XM_039823846.1 mRNA downstream 467205 6229363 ~ 6244419 (-) True baiap2l2a
XM_039825287.1 mRNA upstream 19214 6738111 ~ 6748409 (-) True znf598
XM_039826238.1 mRNA upstream 31369 6750266 ~ 6756280 (-) True slc25a17
XM_039825812.1 mRNA upstream 39363 6758260 ~ 6766315 (-) False rpusd1
XM_039825811.1 mRNA upstream 39363 6758260 ~ 6766306 (-) True rpusd1
XM_039823650.1 mRNA upstream 53983 6772880 ~ 6801536 (-) True arhgdig
TU206522 other downstream 483510 6182408 ~ 6228114 (-) True G152441
TU206279 other downstream 1097956 5574680 ~ 5613668 (-) False atp5mf
TU206278 other downstream 1097956 5610556 ~ 5613668 (-) False atp5mf
TU206260 other downstream 1128763 5580368 ~ 5582861 (-) False bud31
TU206270 other downstream 1157374 5549318 ~ 5554250 (-) False top3a
TU206683 other upstream 887 6719784 ~ 6720643 (-) True G152567
XR_005641918.1 other upstream 1363241 8082138 ~ 8100398 (-) False LOC120574885
TU207167 other upstream 1722282 8441179 ~ 8444381 (-) True G152952
TU207482 other upstream 2012500 8731397 ~ 8733019 (-) True G153172
TU207525 other upstream 2093445 8812342 ~ 8816276 (-) False natd1

Expression Profile