RNA id: TU207421



Basic Information


Item Value
RNA id TU207421
length 639
lncRNA type inter_gene
GC content 0.52
exon number 6
gene id G153130
representative True

Chromosome Information


Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 8612277 ~ 8616112 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


TTTGGCAGATTTGGCAGGACAGCAGTAAACTGACATGGACTTTCTGTCTCTGGAGAACTCCAGGGTGAACTCCTTCTTCATCAGCTGCTTGATCACAGAACAGCAAGCATTTGCCCTTTCCACCTTGGACAGGCCACGCACTTCACTGTTGAACACGTTCATCTTCTCCACCAGACAGGACAGTGCTGTTTCAGTGGCCTCGCCCACTTTTTCATAAATACCCTTGGACTCGTTGTAGTCCAGGGAAGAGTCATTGCAAAGAGCGCAGATGGTAGCCAGCTCGACCAGTCCGTCATACTGACCGCACTTCGTTAATGAGCCATTCTTTGTAACTTCTCCCTCGGGGGTGTACTTTGAGCCTGAGATGTCAAACTGGCTGAGGGAAACATTGTCACCATCGACTTTATCAATGATGAACATCTTAGTTACACACATCTGGTTGGTGGTGAGGGTACCGGTCTTGTCAGAGCAGATGACCGAGGTGCAGCCCAGGGTCTCCACGGAGGGCAGGCTTCTGACGATGGCGTTCTTCTTGGCCATGCGGCGGGTTCCCAGAGCCAGGCAGGTTGTGATGACAGCAGGCAGACCTTCAGGGATGGCAGCCACAGCCAGAGCCACAGCAATCTTGAAATAGTAGAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU207418 lncRNA downstream 280 8551296 ~ 8611997 (-) True G153127
TU207409 lncRNA downstream 24089 8540378 ~ 8588188 (-) False G153124
TU207415 lncRNA downstream 24089 8540378 ~ 8588188 (-) False G153124
TU207412 lncRNA downstream 24089 8554508 ~ 8588188 (-) True G153124
TU207413 lncRNA downstream 24089 8586839 ~ 8588188 (-) False G153124
TU207447 lncRNA upstream 28672 8644784 ~ 8645025 (-) True G153142
TU207448 lncRNA upstream 30971 8647083 ~ 8647291 (-) True G153143
TU207443 lncRNA upstream 43499 8659611 ~ 8684753 (-) False G153139
TU207442 lncRNA upstream 64535 8680647 ~ 8684753 (-) True G153139
TU207444 lncRNA upstream 64535 8680647 ~ 8684753 (-) False G153139
XM_039823763.1 mRNA downstream 91690 8513629 ~ 8520587 (-) True LOC120573875
XM_039823764.1 mRNA downstream 91692 8513629 ~ 8520585 (-) False LOC120573875
XM_039826095.1 mRNA downstream 100437 8506317 ~ 8511840 (-) True LOC120575363
XM_039825717.1 mRNA downstream 107438 8488379 ~ 8504839 (-) False recql5
XM_039824671.1 mRNA upstream 10971 8627083 ~ 8640435 (-) False rabep2
XM_039824670.1 mRNA upstream 10971 8627083 ~ 8640433 (-) True rabep2
XM_039825844.1 mRNA upstream 35520 8651632 ~ 8659219 (-) True si:ch211-11k18.4
XM_039825208.1 mRNA upstream 44190 8660302 ~ 8665654 (-) True nudt9
XM_039824521.1 mRNA upstream 123519 8739631 ~ 8768700 (-) True mapk8ip3
TU207167 other downstream 167896 8441179 ~ 8444381 (-) True G152952
XR_005641918.1 other downstream 511879 8082138 ~ 8100398 (-) False LOC120574885
TU206683 other downstream 1891634 6719784 ~ 6720643 (-) True G152567
TU206522 other downstream 2384163 6182408 ~ 6228114 (-) True G152441
TU206278 other downstream 2998609 5610556 ~ 5613668 (-) False atp5mf
TU207482 other upstream 115285 8731397 ~ 8733019 (-) True G153172
TU207525 other upstream 196230 8812342 ~ 8816276 (-) False natd1
TU207545 other upstream 237648 8853760 ~ 8856957 (-) True tufm
TU207546 other upstream 237648 8853760 ~ 8857571 (-) False tufm
TU207547 other upstream 237648 8853760 ~ 8856957 (-) False tufm

Expression Profile