RNA id: unassigned_transcript_751


Basic Information

Item Value
RNA id unassigned_transcript_751
length 423
RNA type V_gene_segment
GC content 0.49
exon number 3
gene id LOC120574359
representative True

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 9266288 ~ 9303638 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

TCCTCACAGTCTGCTATAAAGACTTGATATCATGCTGTCAGTTgcagcagaagaagagaagctCCCATCAGATCACCTTCAATAGCAACCATGTTCTCtgtagctctgctgctgctgctggctgctggatCCTgtgtgaagtgtgaacagtTGACCCAGCCAGCCTCTGTGACTGTGCAGCCAGGTCAACGTCTGACCATCACCTGTCAGGTCTCTTATTCTCTCAGCAGCTACTGCacagcttggatcagacagcctgcagggaaaggactggagtggattggAAGGAATACTGTAGGTTCACACTACAAAGATTCcctgaagaacaagttcagtatcGACTTAGAGACTTCCAGCAACACAGTGACTCTAAATGGACAGAATGTGCAGCCTGAAGACactgctgtgtattactgtgccaga

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU207952 lncRNA downstream 921 9258210 ~ 9265367 (-) True G153509
TU207900 lncRNA downstream 41968 9217069 ~ 9224320 (-) False LOC120574662
TU207902 lncRNA downstream 46385 9219599 ~ 9219903 (-) True G153462
TU207886 lncRNA downstream 62282 9187250 ~ 9204006 (-) False LOC120574599
TU207892 lncRNA downstream 62429 9196758 ~ 9203859 (-) True G153455
TU207976 lncRNA upstream 55890 9359528 ~ 9359850 (-) True G153527
TU207998 lncRNA upstream 238480 9542118 ~ 9548305 (-) True G153539
TU207921 lncRNA upstream 299219 9602857 ~ 9603106 (-) True G153481
TU208072 lncRNA upstream 448621 9752259 ~ 9798267 (-) True G153588
TU208076 lncRNA upstream 475651 9779289 ~ 9782563 (-) True G153591
XM_039825003.1 mRNA downstream 218165 9043413 ~ 9048123 (-) True cabp5b
XM_039825617.1 mRNA downstream 229460 9020086 ~ 9036828 (-) False sez6l2
XM_039825615.1 mRNA downstream 229703 9020086 ~ 9036585 (-) True sez6l2
XM_039825761.1 mRNA downstream 247548 9011223 ~ 9018740 (-) True kctd13
XM_039825590.1 mRNA downstream 255357 9003265 ~ 9010931 (-) True hirip3
XM_039824654.1 mRNA upstream 40063 9343701 ~ 9345172 (-) True LOC120574364
XM_039824655.1 mRNA upstream 87927 9391565 ~ 9406804 (-) True LOC120574368
XM_039825001.1 mRNA upstream 394005 9697643 ~ 9739305 (-) True LOC120574579
XM_039824129.1 mRNA upstream 757648 10061286 ~ 10149481 (-) False cacna1aa
XM_039824126.1 mRNA upstream 757648 10061286 ~ 10149481 (-) False cacna1aa
TU207944 other downstream 9420 9256322 ~ 9256868 (-) True LOC120574356
unassigned_transcript_750 other downstream 9506 9256285 ~ 9256782 (-) False LOC120574356
unassigned_transcript_749 other downstream 13515 9252234 ~ 9252773 (-) True LOC120574355
unassigned_transcript_748 other downstream 16019 9249839 ~ 9250269 (-) True LOC120574652
unassigned_transcript_747 other downstream 19592 9244442 ~ 9246696 (-) True LOC120574352
unassigned_transcript_753 other upstream 1399 9305037 ~ 9305586 (-) True LOC120574634
unassigned_transcript_754 other upstream 3126 9306764 ~ 9308379 (-) True LOC120574360
unassigned_transcript_755 other upstream 15649 9319287 ~ 9319893 (-) True LOC120574361
unassigned_transcript_756 other upstream 22825 9326463 ~ 9336353 (-) True LOC120574362
TU207918 other upstream 29542 9333180 ~ 9333744 (-) True G153478

Expression Profile