RNA id: unassigned_transcript_752


Basic Information

Item Value
RNA id unassigned_transcript_752
length 429
RNA type V_gene_segment
GC content 0.45
exon number 2
gene id LOC120574591
representative True

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 9276468 ~ 9277002 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

TCTGACAGCTTCATACATATCAGAAAGACTTTGATCAGACATTGGTTCATTGCAGAGTTTGATGGGAAATATGATTGTCTGGGGTTTATTTTTTGTAGTTGCTATTAATGGAGTTTGGAGTGAGATCAAACTGGACCAGTCTCCCTCTGAGGTGAAAAGACCTGGAGAGACAGTGAAGATGTCATGTATCATATCTGGTTATAGCATGACAAGCAACTATATTCACTGGATCCGACAGAGACCAGGAGAAGCTCTGGAGTGGATTGGGAGAATAAGCCCATATAGAAACACTCCGAGCTATGCCAGCTCCTTTCAGAGCCGTTTCAGTTTTACTCAAGATGTTCCCAGCAGCACTCAGTACCTCGAGGTCCAGagcctgacagcagcagattctgctgtttacttCTGTGCTCGACAGACACAGTGACT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU207940 lncRNA downstream 3354 9249829 ~ 9273114 (-) False LOC120574652
TU207952 lncRNA downstream 11101 9258210 ~ 9265367 (-) True G153509
TU207900 lncRNA downstream 52148 9217069 ~ 9224320 (-) False LOC120574662
TU207902 lncRNA downstream 56565 9219599 ~ 9219903 (-) True G153462
TU207886 lncRNA downstream 72462 9187250 ~ 9204006 (-) False LOC120574599
TU207938 lncRNA upstream 11307 9288303 ~ 9715061 (-) True G153498
TU207976 lncRNA upstream 82532 9359528 ~ 9359850 (-) True G153527
TU207998 lncRNA upstream 265122 9542118 ~ 9548305 (-) True G153539
TU207921 lncRNA upstream 325861 9602857 ~ 9603106 (-) True G153481
TU208072 lncRNA upstream 475263 9752259 ~ 9798267 (-) True G153588
XM_039825003.1 mRNA downstream 228345 9043413 ~ 9048123 (-) True cabp5b
XM_039825617.1 mRNA downstream 239640 9020086 ~ 9036828 (-) False sez6l2
XM_039825615.1 mRNA downstream 239883 9020086 ~ 9036585 (-) True sez6l2
XM_039825761.1 mRNA downstream 257728 9011223 ~ 9018740 (-) True kctd13
XM_039825590.1 mRNA downstream 265537 9003265 ~ 9010931 (-) True hirip3
XM_039824654.1 mRNA upstream 66705 9343701 ~ 9345172 (-) True LOC120574364
XM_039824655.1 mRNA upstream 114569 9391565 ~ 9406804 (-) True LOC120574368
XM_039825001.1 mRNA upstream 420647 9697643 ~ 9739305 (-) True LOC120574579
XM_039824129.1 mRNA upstream 784290 10061286 ~ 10149481 (-) False cacna1aa
XM_039824126.1 mRNA upstream 784290 10061286 ~ 10149481 (-) False cacna1aa
TU207955 other downstream 5364 9270733 ~ 9271104 (-) False LOC120574359
TU207944 other downstream 19600 9256322 ~ 9256868 (-) True LOC120574356
unassigned_transcript_750 other downstream 19686 9256285 ~ 9256782 (-) False LOC120574356
unassigned_transcript_749 other downstream 23695 9252234 ~ 9252773 (-) True LOC120574355
unassigned_transcript_748 other downstream 26199 9249839 ~ 9250269 (-) True LOC120574652
TU207926 other upstream 1381 9278377 ~ 9278925 (-) True G153486
TU207966 other upstream 16881 9293877 ~ 9294304 (-) True G153519
unassigned_transcript_753 other upstream 28041 9305037 ~ 9305586 (-) True LOC120574634
unassigned_transcript_754 other upstream 29768 9306764 ~ 9308379 (-) True LOC120574360
unassigned_transcript_755 other upstream 42291 9319287 ~ 9319893 (-) True LOC120574361

Expression Profile