RNA id: TU207955



Basic Information


Item Value
RNA id TU207955
length 311
RNA type TUCP
GC content 0.48
exon number 2
gene id LOC120574359
representative False

Chromosome Information


Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 9266288 ~ 9303638 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


TTTCAACATAAACCATGTTCTCtggagctctgctgctgctgttggcagCTGGATgtgtgaagtgtgaacagtTGACCCAGCCAGCCTCTGTGACTGTGCAGCCAGGTCAACGTCTGACCATCACCTGTCAGGTCTCTTATTCTGTTGGTAGCTATGCTacagcttggatcagacagcctgcagggaaaggactggagtggattggATGGAAATATACTGGAGCTTCATACTACAAAGATTCcctgaagaacaagttcagtatcGACTTAGAGACTTCCAGCAAGACAGTGACTCTAAATGGACAGAATGTG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU207952 lncRNA downstream 5366 9258210 ~ 9265367 (-) True G153509
TU207900 lncRNA downstream 46413 9217069 ~ 9224320 (-) False LOC120574662
TU207902 lncRNA downstream 50830 9219599 ~ 9219903 (-) True G153462
TU207886 lncRNA downstream 66727 9187250 ~ 9204006 (-) False LOC120574599
TU207892 lncRNA downstream 66874 9196758 ~ 9203859 (-) True G153455
TU207938 lncRNA upstream 17199 9288303 ~ 9715061 (-) True G153498
TU207976 lncRNA upstream 88424 9359528 ~ 9359850 (-) True G153527
TU207998 lncRNA upstream 271014 9542118 ~ 9548305 (-) True G153539
TU207921 lncRNA upstream 331753 9602857 ~ 9603106 (-) True G153481
TU208072 lncRNA upstream 481155 9752259 ~ 9798267 (-) True G153588
XM_039825003.1 mRNA downstream 222610 9043413 ~ 9048123 (-) True cabp5b
XM_039825617.1 mRNA downstream 233905 9020086 ~ 9036828 (-) False sez6l2
XM_039825615.1 mRNA downstream 234148 9020086 ~ 9036585 (-) True sez6l2
XM_039825761.1 mRNA downstream 251993 9011223 ~ 9018740 (-) True kctd13
XM_039825590.1 mRNA downstream 259802 9003265 ~ 9010931 (-) True hirip3
XM_039824654.1 mRNA upstream 72597 9343701 ~ 9345172 (-) True LOC120574364
XM_039824655.1 mRNA upstream 120461 9391565 ~ 9406804 (-) True LOC120574368
XM_039825001.1 mRNA upstream 426539 9697643 ~ 9739305 (-) True LOC120574579
XM_039824129.1 mRNA upstream 790182 10061286 ~ 10149481 (-) False cacna1aa
XM_039824126.1 mRNA upstream 790182 10061286 ~ 10149481 (-) False cacna1aa
TU207944 other downstream 13865 9256322 ~ 9256868 (-) True LOC120574356
unassigned_transcript_750 other downstream 13951 9256285 ~ 9256782 (-) False LOC120574356
unassigned_transcript_749 other downstream 17960 9252234 ~ 9252773 (-) True LOC120574355
unassigned_transcript_748 other downstream 20464 9249839 ~ 9250269 (-) True LOC120574652
unassigned_transcript_747 other downstream 24037 9244442 ~ 9246696 (-) True LOC120574352
unassigned_transcript_752 other upstream 5364 9276468 ~ 9276996 (-) True LOC120574591
TU207957 other upstream 5376 9276480 ~ 9277002 (-) False LOC120574591
TU207926 other upstream 7273 9278377 ~ 9278925 (-) True G153486
TU207966 other upstream 22773 9293877 ~ 9294304 (-) True G153519
unassigned_transcript_753 other upstream 33933 9305037 ~ 9305586 (-) True LOC120574634

Expression Profile