RNA id: TU210659


Basic Information

Item Value
RNA id TU210659
length 209
lncRNA type inter_gene
GC content 0.37
exon number 1
gene id G155413
representative True

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 16314766 ~ 16314974 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

GCTGCTTTTAAGTTGCAGCAAGGTAGTTATAAGCAACTGAACCTATGTGCAGGTTTTGGTTGCTGTTCTAAACTATGCAGTaacaaaattataaattaaTCAGAATCTGATACAAATCTGATCTAATTAACCCCTGTCTTGATAATGTGACCATCATATGCCTAGGCTGTTTGATGTTGTTGGGCTCTGCAGAAGAACAAATAAAGGac

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU210639 lncRNA upstream 52762 16259782 ~ 16262004 (+) False LOC120574544
TU210628 lncRNA upstream 73684 16216514 ~ 16241082 (+) True G155393
TU210615 lncRNA upstream 113654 16158651 ~ 16201112 (+) True G155384
TU210537 lncRNA upstream 414244 15893874 ~ 15900522 (+) True G155342
TU210549 lncRNA upstream 422732 15891095 ~ 15892034 (+) True G155346
TU210654 lncRNA downstream 880 16315854 ~ 16387522 (+) False camsap3
TU210827 lncRNA downstream 165582 16480556 ~ 16480805 (+) False col5a3a
TU210835 lncRNA downstream 247686 16562660 ~ 16563997 (+) False olfm2a
TU210903 lncRNA downstream 337959 16652933 ~ 16653513 (+) True G155602
TU210924 lncRNA downstream 403202 16718176 ~ 16722663 (+) True G155616
XM_039824871.1 mRNA upstream 470 16306226 ~ 16314296 (+) True xab2
XM_039824875.1 mRNA upstream 32226 16276452 ~ 16282540 (+) False LOC120574510
XM_039824873.1 mRNA upstream 32226 16276452 ~ 16282540 (+) True LOC120574510
XM_039824874.1 mRNA upstream 32226 16276452 ~ 16282540 (+) False LOC120574510
XM_039824882.1 mRNA upstream 39708 16262716 ~ 16275058 (+) True stxbp2
XM_039824847.1 mRNA downstream 858 16315832 ~ 16340889 (+) True camsap3
XM_039824849.1 mRNA downstream 858 16315832 ~ 16340889 (+) False camsap3
XM_039824848.1 mRNA downstream 858 16315832 ~ 16340889 (+) False camsap3
XM_039824913.1 mRNA downstream 48285 16363259 ~ 16366875 (+) False LOC120574536
XM_039824912.1 mRNA downstream 48286 16363260 ~ 16366875 (+) True LOC120574536
TU210542 other upstream 423748 15887190 ~ 15891018 (+) True LOC120574525
TU210337 other upstream 786348 15527941 ~ 15528418 (+) False rasd2
TU210329 other upstream 801956 15510225 ~ 15512810 (+) True arl16
TU210192 other upstream 1175060 15135791 ~ 15139706 (+) True G155088
unassigned_transcript_851 other upstream 1322258 14992013 ~ 14992508 (+) True LOC120575440
XR_005641831.1 other downstream 442671 16757645 ~ 16766745 (+) False raver1
XR_005641811.1 other downstream 1401765 17716739 ~ 17724229 (+) False rmi2
TU211348 other downstream 1422005 17736979 ~ 17741048 (+) False pla2g10
XR_005641818.1 other downstream 1965816 18280790 ~ 18304091 (+) False ttyh3a
unassigned_transcript_856 other downstream 2010355 18325329 ~ 18325400 (+) True trnac-gca_23

Expression Profile