RNA id: XM_039824059.1


Basic Information

Item Value
RNA id XM_039824059.1
length 2635
RNA type mRNA
GC content 0.46
exon number 15
gene id il12rb2l
representative True

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 10975641 ~ 10987160 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

TCCAGAAATGGGCGGGGCTATCTGGTAAAAACCGAACTATCAATTTGAATTTAACAACAAACTTTCTTTGTAAACTGTGTTTATATCGCTGCAGAATGCGCGACAGACACTCCGGTGTGTCTCATAATGAGGCACTAGAGGCCAGGGTCCAAATGTAATGGCCACATTTCGGACAAGGTGGCGTCTGTCCATCTTGCTGGTCATCCTGCCAAATTGTTTTGCCCCAGGTCCTcctgctgctccctctgctCCTGACTGCTCTATCCCATGTGGTGAGATAAACAATTGTGTAAATATCCACTGTAGTTGGGATGCAGGACCGGATCCTCAGCTCACCACCAACTACAGCCTGCACTGGAAGACAGCAAATACAGAAGAGGGGCATGTGATCAATGGGCCCAGTTTGAGTGGGATTATCCAGCGTGAAAGCTTCCCCAGCCATGAAGAACTTCATGTGTGGGTCCAGGCTAAGAACCAGCATGGTTCTGCCAAATCTAAGGAAGTTATATTTCATACAGAAAATATCATAAAGCCGCCCCCTCCTAAAGTCACATCGAGCCATAAGGAGTCATTAGAGATTGACTGGATTTCCACTTGTGATGAGATGCAGTTCTCTTTGGGAAACTGTTTTTTCCGATATCGGACAGAGGCAGACCAAGTCTGGCATCAGGAAGAGGTGGGAAACCATGGCCATACATTTGACAGTCCCCAGCCCAACACGGTCTATGAATTTCAAGTTCGCTGTTCCTGTGTCCCAGGCTTGTTGAGTGACTGGAGTGCAACCCACAGAATACGAAGCACAGAGACGGCCCCTGTAGGAGAGCTGGATGTATGGAGGGACTGTGGGATATCCCAGGAAAGCTCTGACTGTGTTCTGACCTGGAAGACGCTTCCTGTATCTCGGGCTTGCGGCCTCATTCTGGGATACGAAGTCAGACTGTCTTACAATAACAGGACTACCGTGTTGGTGAATATGTCCACAGCTGAGCCAAGGGGGCGATTGTTGTGTGATGAAATGCGATGCCACTTCACTTTCTCTCTAAAGGATGTATCATCAGTCAGTGTATCTGCCTACAACGCACATGGTGCCACAGTGCCTTCTTATCTGCCTATGCCAATACCAGGTAAAGAGAAAGACGAGCAAGCTATTCACCTCATGATGAATGAAGAGAACCTCACTTTGTCCTGGGATCTGCCCTCTCAGCTTTTAGACAACCTGAAGGAATATGTGTTGCAATACAAACAAGCGGGAAGTCCTCCATGCCaaggatttgattgggtcaaaGTAAACAAAAGCCAAACAACAGGAATTTTGAAAGGTCAATATACAAAGTACAAACCCTACCAAGTTTCACTGTTCACAGTATCTCACAGCAATAAAGTTCATCACCTATCATCAGTTATTGGATATTCACTTCAAGGAACCCCTTCCAGCGTGCCATCATTTAAGGTGTTTTCCATTGCTGCTACTCATGTGTACCTGTTTTGGGAGTCTATTCCCCTCTCCAAGCAGAATGGGTTGATCCTGTACTACCAAGTAGTAGTAGACAGTGGAGTAAACGGACAAAACGTGTACAATGTGAATGCATCCTCACAGCATGAAAGTAAGACTTTTAAGCTGCTGCATCTCAGTCCAGGACAGGAGTATGAGGTGCGGATAAGAGCTGTGACTGCAGCCGGGCCTGGAGCAAATACCACTGCAAAGTTCAAAACAAAGCACCACGAAGATTTCGCGCTCTTAATAGCAATCGTGCTTGGAACCCTTTTTGTGGTTGTAATATGTGTTCTTCTTGCTTTTTACAGAGCTTGTCGAGGAGAAAACAAAGCATGTCCACTGGTGCCTCCTTTTTTCTATGACAAAGTGCCAGATGCGCGCAACAGCCACATTTTCAGACACATGAAGCACCAGACTAATGACCCCTTGACATGGATCTGCATTCCGGTCTATGAGCCACATCCCAAGATCTCTCTGTTGGAGGTTGTGGAAATCCAGCCCTGGGCCTTTGAGTCCTCCCTGGAGAAAACCACCAACACTGACAGATTAACTAGGCCAGTGGTTGGAGATGGGTGCTTACAGATGGACTGCCAAGATGATCAGAGGGAGGAAGCTGTCACAAAGGAGTGTCATAGGACAGACCACAGATATCGAAGAGAGGAGTACAGCAAAATGGTTGACTCAGATGAGGAGAGGGATAGGGAGGAAGATGAGAACAGGGAGGATTGTTGGAGCTCAACAGAGGAAGAACAGTTAACGTCGGGTTACGAAAAGCACTTCATGCCAACTGCTTTTGAAATACTGGAAATTTGATGTTTTCACTACGTTGACTTGTAGACATTTATCTCAGATATgtgttgtatttatttgtgcAGAAAATGTTCAATGTCGGAATGTGATTTTAGATGATGACGGTCTGGACATCTCTCTGCAGGACCCAGGAGGACGGAATCCGGTCATGGGACTGCTTTATCTACTAAAGCTAATGACAATCCCCCAGTTCTATCTACCCTGACTTTcaccttttttatttgtttgtttgattaatTTTGTTTGGCTTTATCTCAATGATGTCTTATGTTGAGCCTTGTTGTGAGTAGCATTTTAAGAGGcaaaaataacagaaatgtgtcaacaaac

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU208598 lncRNA downstream 16120 10950571 ~ 10959521 (-) True G153950
TU208577 lncRNA downstream 68033 10905355 ~ 10907608 (-) True G153937
TU208277 lncRNA downstream 380634 10594743 ~ 10595007 (-) True G153734
TU208203 lncRNA downstream 681475 10286635 ~ 10294166 (-) True G153671
TU208192 lncRNA downstream 806202 10163444 ~ 10169439 (-) True G153663
TU208584 lncRNA upstream 46046 11033206 ~ 11035516 (-) True G153943
TU208656 lncRNA upstream 81883 11069043 ~ 11073776 (-) True G153987
TU208730 lncRNA upstream 284659 11271819 ~ 11272848 (-) True G154036
TU208792 lncRNA upstream 365043 11352203 ~ 11352565 (-) True G154088
TU208823 lncRNA upstream 479748 11466908 ~ 11467112 (-) True G154115
XM_039825578.1 mRNA downstream 5885 10954170 ~ 10969756 (-) True LOC120575016
XM_039825580.1 mRNA downstream 8781 10954170 ~ 10966860 (-) False LOC120575016
XM_039825783.1 mRNA downstream 27971 10942812 ~ 10947670 (-) True fbxw9
XM_039824607.1 mRNA downstream 34474 10931798 ~ 10941167 (-) True dhps
XM_039824728.1 mRNA downstream 155356 10812853 ~ 10820285 (-) True LOC120574454
XM_039824071.1 mRNA upstream 1007 10988167 ~ 10994030 (-) False rln3a
XM_039824070.1 mRNA upstream 1007 10988167 ~ 10990702 (-) True rln3a
XM_039824073.1 mRNA upstream 21482 11008642 ~ 11016591 (-) True LOC120574053
XM_039824074.1 mRNA upstream 21482 11008642 ~ 11015694 (-) False LOC120574053
XM_039824076.1 mRNA upstream 23039 11010199 ~ 11016591 (-) False LOC120574053
XR_005642003.1 other downstream 7467 10968106 ~ 10968174 (-) True LOC120575512
TU208443 other downstream 184102 10784112 ~ 10791539 (-) True LOC120574455
TU208212 other downstream 585465 10360812 ~ 10390176 (-) False gtpbp1
TU208206 other downstream 585521 10360801 ~ 10390120 (-) False gtpbp1
XR_005641868.1 other upstream 91427 11078587 ~ 11080606 (-) False LOC120574486
XR_005641867.1 other upstream 91427 11078587 ~ 11080606 (-) False LOC120574486
XR_005641866.1 other upstream 91516 11078676 ~ 11080606 (-) False LOC120574486
TU208632 other upstream 123808 11110968 ~ 11137482 (-) False tnrc6c1
TU208722 other upstream 216290 11203450 ~ 11225546 (-) True G154033

Expression Profile