RNA id: XM_039824446.1


Basic Information

Item Value
RNA id XM_039824446.1
length 1548
RNA type mRNA
GC content 0.49
exon number 6
gene id grb2b
representative True

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 3974559 ~ 4017811 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

AATAAACGTCGCAAACCTTATGCTAGTAGCGATCCCTCGGACGGGCTGTTTGAGCGACATCAGGCATAACGTTACATCGGTTGTTGCCTCTCAAGAGGAAGCAGCGGTTGGATAAATCCCACTATATGGTTTTAGTTTGTTACGGTGGCAGCATCGAAACGGAATATCTCGAGTGGAGCGTTCCTGTAACCTTTATGTGAGGTCCAAGCCCTAAAGGAGCGGGTCATAGACGGGAGGAGAGACTCGGAGCAAAAGCATCTGGCCACAGAAGCCTGGAtacgtgtttttattttttattcagcccccgaaacacaacaacaatcaAGCCGTTTTCCAGCACGCAACAACCACCATGGAGGCCATTGCCAAATACGATTTCAACGCCACTGCTGATGATGAGCTTAGTTTCAAGCGTGGCGAAGTCCTCAAGGTATTAAATGAAGAGTGTGATCAGAACTGGTACAAGGCAGAGCTAAACGGAAAAGATGGCTTCATTCCCAAGAATTACATAGAGATGAAAGCCCATCCGTGGTTCTTCGGGAAGATTCCCCGGGCCAAAGCAGAGGAGATGCTAAACAAACAGCGGCATGACGGGGCCTTCCTCatcagagagagcgagagcgcaCCAGGAGacttctccctctctgtgaAGTTTGGAAATGACGTCCAGCACTTCAAGGTTCTTCGTGACGGGGCTGGAAAGTATTTCCTATGGGTGGTGAAGTTTAACTCCCTCAACGAGCTGGTAGACTACCACCGCTCCACCTCGGTCTCTCGCAATCAACAAATCTTTCTGCGAGACATAGAGCAGGTCCCCCAGCATCCCACATATGTGCAGGCGCTCTTTGACTTTGACCCCCAGGAGGAAGGAGAGCTGGGTTTCCGACGCGGAGACTTCATCCAGGTCCTGGACAACTCTGACCCCAACTGGTGGAAAGGAGGCTGCCACGGTCAAACGGGCATGTTCCCCCGCAACTACGTCACGCCTGTCAATCGGAACATGTAAAACAGTCTGACCATGTAAACCACAACAGCCACAACCGCAACctatcaccaccaccaccataatcatcatcgtcatcatcgtTCTCGATCTCATCAGCCCCCATCCAAGCCCCCAACCACCCCTCCACCCCTCTTCGCCATCCCACGATAACAGGAGCAGACAGGAAGAACGCAAACAActgaaaaaagagagataaaaCAGGAGTAGTGCTGCCGTAGGCGTCGCTGAGTGGGTGGCAGCTGAGCAAAATCAACTTTTTTACTTGTGCAGAATGTTCACCTCCCCAGTGAACGCCTCGGCGAGGACTGAACTGTCTTTGAGGGAAATCTAAATGCAGAGAAACTAAAGAGTAGCGCACCATCCCGCGAAGATAACCAAACGATTCTACCGCTCCCACAGCTGCTTCTGtcttctccttaacttcttaaCATTCTGCCTtccttttgtgtttgtttagttttctttgCCGCATGTTGTTTTAATCGCCTAAAATGAAATGCCTACCGATAAATCCTAACTctgttttaaagaagaaaaaaaaa

Function

GO: NA

KEGG:

id description
K04364 GRB2; growth factor receptor-bound protein 2

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_005641849.1 lncRNA upstream 19418 3953544 ~ 3955141 (+) True LOC120574263
TU205247 lncRNA upstream 19430 3953555 ~ 3955129 (+) False LOC120574263
TU205252 lncRNA upstream 21127 3952890 ~ 3953432 (+) True G151480
TU205254 lncRNA upstream 21127 3952935 ~ 3953432 (+) False G151480
TU205253 lncRNA upstream 21157 3952890 ~ 3953402 (+) False G151480
TU205474 lncRNA downstream 150379 4168190 ~ 4168505 (+) True G151650
TU205487 lncRNA downstream 195189 4213000 ~ 4214435 (+) True G151662
TU205490 lncRNA downstream 197236 4215047 ~ 4215303 (+) True G151665
TU205491 lncRNA downstream 197582 4215393 ~ 4215658 (+) True G151666
TU205500 lncRNA downstream 212709 4230520 ~ 4235687 (+) True G151673
XM_039824518.1 mRNA upstream 22019 3826183 ~ 3952540 (+) True usp43b
XM_039824519.1 mRNA upstream 22020 3815121 ~ 3952539 (+) False usp43b
XM_039826094.1 mRNA upstream 207498 3716564 ~ 3767061 (+) True ntn1b
XM_039824415.1 mRNA upstream 399836 3566313 ~ 3574723 (+) True hmox1a
XM_039823870.1 mRNA upstream 503544 3469465 ~ 3471015 (+) True foxd7
XM_039824449.1 mRNA downstream 18980 4036791 ~ 4074967 (+) True LOC120574218
XM_039824447.1 mRNA downstream 18980 4036791 ~ 4074967 (+) False LOC120574218
XM_039824448.1 mRNA downstream 18980 4036791 ~ 4074967 (+) False LOC120574218
XM_039824450.1 mRNA downstream 18981 4036792 ~ 4074967 (+) False LOC120574218
XM_039824451.1 mRNA downstream 18981 4036792 ~ 4074967 (+) False LOC120574218
TU205238 other upstream 311277 3658997 ~ 3663282 (+) True G151471
XR_005642001.1 other upstream 591946 3382514 ~ 3382613 (+) True LOC120575510
XR_005642000.1 other upstream 593173 3381287 ~ 3381386 (+) True LOC120575509
TU205031 other upstream 826582 3146504 ~ 3147977 (+) True G151315
TU204936 other upstream 971195 3001899 ~ 3003364 (+) True G151240
TU205526 other downstream 300362 4318173 ~ 4319498 (+) True G151695
XR_005641832.1 other downstream 320283 4338094 ~ 4346405 (+) False LOC120574173
TU205564 other downstream 382219 4400030 ~ 4403862 (+) True pde6hb
TU205565 other downstream 382219 4400030 ~ 4455745 (+) False pde6hb
TU205566 other downstream 382219 4400030 ~ 4469278 (+) False pde6hb

Expression Profile