RNA id: XM_039825800.1


Basic Information

Item Value
RNA id XM_039825800.1
length 6760
RNA type mRNA
GC content 0.49
exon number 22
gene id evplb
representative True

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 4172880 ~ 4192394 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

GCGAGGAATGTGAAGCGCCAGGAGTGTGGAACAGGTCCGCCTGGTCCGCTGCTTCCACTGATGACACACCTGCTGGTCTGGGTGGAGCTGAGACAGGTGGACGCTCCTTAACTTAGTGGGAGACGCCGCAAGAGACAAGAAGGAgcgagaggaaagaggagaggagagagtgagGAATTGGAAGAAACACAGTCGGACTAAGATTGGAACAAACAGTCTCCCAAGATGTCGAATCCTGTAAAGATCAGCAAGAGTCAGGCCACTGACCTGGCTGTGGTGATCGCTCGCATGCAGAAGAGTGCAGACCAAGTAGAGAAGAATATCCTGGCAACAGAGGAGCTGCTGGCTGTGGACACCGAGCGTGATGGGAAGAAACAGCCCCTGATCCACCAGAAGGAGAACACAGACAGCCTGATGCAGGCTGAGGAGCTGCTGAAGAATCTCTTCATGGACGTGGACAAGGCCAAGAGGCTGAAGCACCCGCAGGCCCTCGAGATAGAGAACGATGTGAAAAACCTCCACGATCGCTGGGTGAAGGACTGTGCCATCTACAGGGAACTGTATTCCCAGGGGCTAACTTTGGATCCGAAGCAAAAGATCGACTGGGGCCCTCTGCTGGATGAAAAACTGAACCAGCTAAAGGCAGCCGCATATGGCCCCAGCCTGTCTGACGTAGAGAAGCAGATTGCAGCACATAACATTCTGCACCAGCAGATCGAGGCCTACAAAGCCCAGCTGGAGCCCAGCACCACCGCCTCACAGGAGCAGTACGCCGCCATCAAAGAGAAATATGCCAAACTttatGAAGCCTCCCAACAGAGACGCAACCACCTGGCCTCTCTGTACGAGTACTTGCACAGCTGCAATAAGGAGCTGGTGTACCTGTCAGGCCAGCAGGAGAGGATCCTCCAGAGAGACTGGAGTGATCGCATGGTCGACCCTTCAGGCGTCAGCATGGAGTATGAGAAATTCAAAAACAGCGGACTGATAGCACATGAGAGTGAGGTCAACAAGCTGCAGCTGGAAGGCACTCGTCTTGTTGAAATGAAACAACCTGGCAGCTCAACAGTGAAGGCACACAGAGATGCTGTGCAGTCTGAGTGGCAAGCGTTCCTCAACTTGTGTCTGGCACAGGAAAAACACCTGAACAACATTGAAGACTACAAGAAGTTCCAGCTGGATGCAGAGACGTTGTCCGAGTCCCTGGAGAGGCTCAATTCCTCTATGGACCCAAAGTCTGTGGCCAAGAAGAGCAACCCTCAGGTCCTGATGGCGCTGGAGGGAGATGAACCAGCAATAAAGAGGAATGAGCAGCGCCTGGCCGCCCTCAAGGAGCTCAGCAGCGATGTGGTGCCTCTGAAGTTACGGCGGGTCCCGCCCACCAAACCCACCTCtgcagtgtctctgtgtgactgGGCCGATGAAGAGAACACAGTCAGGCGTGGCGAGGCACTAACGCTAAAGTCCAACTCTGATAATATGAACTGGGAGCTTCAGACGAGCGGTGGGAAGACCAGAACCCTCCCTGGGGCATGTTTCATGGTCCCTCCACCTGATGCTGAGGCGCTGGAGAAAGTAAACAGtctgGAGAGAGCGCTGACGGACTTGAAGACGCGTAGATCTGCACTAATGGCCTCCCTGAAGAACCCCACTGTGGAGGTTGTCCGCCCTCAGAAGGCAGCCGCTGTTCAAAGCGCTCCAGAGGATCCCAGAGCTGCGGAGCTCACCAGCGAATTAGACAAGATCAACAAAGCCCTGGAGCGGAGCGAAAAAGAAATCCTGAGTCGACTCAGAGCGCCGCTAGACAACCGCAACCCCACACAGGACCTGACAAACAGGCTGCAAGAGCACGAGAAATCTGCTCAGACTGTGAGAAAGCTGGAGTCAGAGAAGTCAGCAGtccagagagagatggagcctATTCTGGCCAAGAAACCCCTGGGACCCAGCGCCTCTACGCTGCCCCTCAAACTCAGCACTGCCAACAACAAGATTGATGACCTCAACGCCCTCATCGATCTTTATAATAAAAAAGCTACAGCTTCCATGTTCCTGgagaagcagaaacagactGTGGAAGGCATCGTCTCTGGGTTTGAGGAGAAACTCGCTAAAGATGGCGTCATTCTTGATCAACCCAAAGTCCTCCCGAGTCGCAACCAGCAGCTGCAGGTTTTGCGTCAGGATGTCACCTCAAAGAAGGATGAGTTGACTAAATTAGGCAGAGACTTGGACCTGACAAGGCAGTCATGCCGCTCCTTGCAGCAGAGCTTCAATGAATACTGTCCTGACATCCGCCGCCAGGAGAACGAGGTGAAACAGCTGAAGAACCGTTACACGACTGTCAATAATCAGCTTCAGGAAAGGGCTTGTCTCATACAAGAAGGAACCAGTAAAAACCAAGATTTCCAGAATGCTGTTCAGTCCCTGGATTTCTTCTTGGTCAATTTGCCCAATAATACAATCAAACCTACTGATGATGTGGCGCAGATGAAAGCCAAGCAGAATTCTCAGAAGagAGTAGTGGAGGACATCAAGAGGAAATCGGGTGATTTAGATCGAGTCAAGTATCTTTCCCGTGATCTGCAGAGCGTCTTGAATGAGTATGACAGTAAGTCAAGCACTTACCGTAGCACTCTGAATGATGACGATAACGATGATGACACCGGCAACGATGATGAACCAGTCCTAAAGATACGTAAAACTTCTACTATGGCTCAGGCCGTACAGAGAAAGGAGAAAGATCTACTGAACCTTTTCTCTCAGGTGTCTGCGGAAAATGACCTGCTACTCAGACAGTTGGAGACGGCGAGGAACATCAAGGCCAGGAATGAAGAGCAAGTTAGTCAGGTGGTGGTCAACCAGCAGCTGCAGCAACAGAGCCAGAAGAAGGACCTGGAGGAGAGTGGTAGTCTGAAAAAGGAATTAAATGAGGAGGTTGACAGGCGCTTACATGCTGAAAAAGACCTGGAAACATACCGTAAGAGGTATGTGTCTTTGAAGAGTAGGAGAGGAGTAGAGAGgttggaggagaaggaggtggtGCAATACTACCGTGACCCAAAAATGGAGGCGGATATAGTGTCCCTGAAAAGTCAGATACAGGATGAAGCATTGAAGAGGTCAAGAACCCATTCAGAGATAGAAATTATAAATGAGAAGATTATCACAGTAGAAACACAGCTGACCAAAATCGAACCAAAACTGGTGACCAAGCTACTGTATGAATACGAGAGAGACCCGCAGCTTGACAAAGAAGCCGTCAAGATGAGAGATGAGATGCAGAGGATACGACTGGAGCTCCAAACAAGAGATACTGAGTCAGTTCATGTGAAAACTGAGCTCACGGTTCTGTCTCAGCAGAAACCCAAAATCAGGGAGACGGTTGTTAAGAAAGAGGTGGTGAGGCTTGAAAAGGATCCAGAGATGCTGAAAGCTGTTCTCACGTTCCAGAATGATATCACCCAGGAGGAATCGCAATTCAAGTTGCTCAACGATCGAATTTTTAGCACAAGGAGCCAGATAAACACGCTGGAGAGGGTCATTCCCACCATCCAACCCAAGATAGTCACCAAGGTGGTGAAGCAAGTACAGCAAGATCCAGAAGTGCTGGAAGAGTCAAAGAAACTACGAATTGCcttggaggaggagaaagatgaGAATGTTATCTTGATGAAGGACCTGACCACCTTACAGCTACGTTATGGTGAGGTGGACAAGCTCAAGTCTAAAGTCGAAGTCAAGGAGATTGTCAATGAGATCTACAGAGTTGATCCTGACACAGAAGTCGAGCTGGTACGTCTGAGGAAAGAGCTGCAGGACACCAGCCGTAACAGTGCAGACCTGGAGAAAGAAATCAAGACAATTATAACAACTCTGACTACTCTGCGCACTCAGAAACCCAAAGTGGAGTACAAGGAGGTGACCCAAGAGATCATCAAAGAAGAGAAAAGCCCCGAGGTCACCAGAGAATTGCAAAGGCTGAACAACCAAGTCTCCCGTCTGCTAGTCAACTATGACACCACCCTGGAGCTGCTCACCCACCTACGTAAAGAAAGAGACGAGCTGAAAGCTGAAAAATCCAAAGTGGAGACCAAGCTAGTTACTAAAGAGCTCATCAAATATGAGAACGATCCTCTTCTTGAGAAAGAGGCGGACAGACTTCGAAGGAATGTAAGAGAAGAGATTCAACAACGCCGCAGTGTGGAGGAGGTTCTCTACGACCTGCAGAACCAATACATTCTCCTGGAAAGGCAGAAGCCGGAGGAAAAGATTGTCATGCAGGAAGTGGTGCGTCTTCAGAGGGACCCCACGCAGGTTCTGGAGCATGAGAAGTTGAACAAGAGCCTGGACGATGAAATGAAAACCCGCAGAAAGATTGAAATGGAGGTCCGACAGCTCAGAGCCCTGATTCAAGACAAAGAGAATACCCTGGCTCAGGCGGACGATCGTCAGAGGAAGATTCAAGTAGAGTCAGAGCTCAGGCAGATCACATCACGCATTATTGAACTGGAAAACACTCCACCACCTATTGAGGAGAAGATTGTCATCGAGGAGATCCTGAAAGTGGAGAGGGACCCTAAGCTGGAAAAACTTACTGATGGTATACGTGTCGACTTGGAGACTGAGGGCACCAATATTAGCCGTCTACAGAGAGAAATCCGCAACCTGCAGCTCAGGTTGGAGATTCTGCAAAAGGAGAAGTCAATTGAGAAGGTGGTTTACAGAGAAGTTGTTCGTGTCGAAAAAGACCCGGCAGTGGAGGCTGAAAGGGAGCATCTAAGAGAGCTCTTAACGCAGGAGAGAAATCTCCGACGTGACCAGGAGGAAAAGGTTCAGAACATCCACATCAGAATGACTCACATGCAGACAACGAAGTCTGTGTCTTCTCAGGAGGGGACCACTCTCGTCGCCAACAGAGATGctctgcagagagagaaggaggataTTCTCCGACAGCTCAAAATGCTAGAGTCTCAAAGACAGGAAATCAGCATAACCTTCCAGCAAAAGTCCAAGCAGATGAGTGAGATGACCCAGATTGTACGACAGAGGAGTCTTAAGACATCCTCTCAAATACAACGGCTGGAGAGAGAAATCCTCAAcgaaaaagacaaaatacacGAGAGGAATACACTCATCATGGAGCTGCAGAACAACGTCAAGAAAGAGGACCATTCTGAAACTCACACCAGGGAGACAAATCTTTCCACCAAGATCACCATCCTGGACCCAGAAACCGGTAAAGACATGTCTCCCTATGATGCCTACGTGCAGGGGCTAATTGATCGCAACCACTACATTAAACTATCGGAGTTGGAATGCGACTGGGAGGAAATCACTTCAACCGGTCCAGACGGGGACACAACAATCCTGCAGGATCGCAAAAGTGGCAAACAGTTCTCTGTCAAGGATGCTCTGAAGAATGGTCGCTTGACCCAGTATGACGTGACACGCTACAAGGAAGGGAAAATGTCCATTTCTGAGTTTGCCCTCATGGTTGTAGGGGAAACCAAAAAGCCCTTTGTTCCTCCAATAACAGTCCCAAGATCACCGACCAAACCCATCCCAAGCTCTCCCTTGAACTCCATGCCGCCCTCCATGAGGTCCTCATACCCCAGCCTCAACACTCACTACAGTGGCAACTTGGACAACTACAGTGCTGGCAGTTTGACCAACCTCAATGCTGGCAGTTTGACCAACCTCAGTGCTGGCAGTTTGACCAACCACAGTGCTGGCAGTTTGACCAACCACAGTGCTGGCAGTTTGACCAACCGCAGTGCTGGCAGTTTGAACAACCTCAGTGCTTCAGTAGGGGATGAGCATTTCCCCATCTCTGGTATTTTAGACACCACCACTGAGAGTCGCATGTCTGTACGAAGTGCCCTGACCCGCAAACTAATTGACGCCAACACAGCTCTGAAGCTGCTGGAGGCACAAGCAGCATCTGGGGGAATCGTCGATCTCAGCAAAAAGGACAAACTCTCTGTCCACAAGGCAGCTGAACGCGGCCTCATTGACTCAAATGACATGTACAAGCTTCTGAATGCCCAGAAGGCCTTTACTGGTGTTGAGGACCCCGTGACCAAAGACCGTCTCGCAGTGGGACAGGCTGCGATGAAAGGGTATATTCCCCAAGAAAATGCCAGGAGGTACATGGAGGCGCAGTACCTGACCGGTGGGTTTGTGAATCCCGCTAAAGCAGGCCGCCTCACTATCAAAGAAGCTCTCGCCAGTAATATTATTGACAGCACAACAGCTGATCAGCTGAAAGACGAGGCCTCCCACACAAAAGAGCTAGTAGACCCCATCACTAAAGAGAAGATATCGTACAAGCAGGCGATGGATCGGTGTAAGAGAGACATCAGCACGGGgctcctgctgcttcctgcagCCTCCACTGATGCTGCAAATGCCCCATCGTACTCAAACTATCGTTTCAGCGCCTCTAGAGTCTAGAGGTGGAGTTTAAGATGTTTTATTTGGCGCAGCCACTGGTGCTAAAGGGTGTGTGATAACGCTAACTAACTAATCCACGTAaagataaaaatgaaatgtttttaaactttTCAAAAACACTGGGTGGGAAAACTACATTTTTGGTGAAACTGTAAGTGTGGATCTGCTTTTTTCAGTACTATTTTTGGGCCTGCTGTTAAAATGAGGgtaatgtttgttttatatggtaaattttaaagttttttcagCACTCTCAAGCTAAATCCTTCATAAGTGCCTATTAAATTCCACAAGCCTCACA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU205474 lncRNA upstream 4375 4168190 ~ 4168505 (+) True G151650
XR_005641849.1 lncRNA upstream 217739 3953544 ~ 3955141 (+) True LOC120574263
TU205247 lncRNA upstream 217751 3953555 ~ 3955129 (+) False LOC120574263
TU205252 lncRNA upstream 219448 3952890 ~ 3953432 (+) True G151480
TU205487 lncRNA downstream 20606 4213000 ~ 4214435 (+) True G151662
TU205490 lncRNA downstream 22653 4215047 ~ 4215303 (+) True G151665
TU205491 lncRNA downstream 22999 4215393 ~ 4215658 (+) True G151666
TU205500 lncRNA downstream 38126 4230520 ~ 4235687 (+) True G151673
TU205531 lncRNA downstream 137655 4330049 ~ 4346388 (+) True G151697
XM_039825059.1 mRNA upstream 7409 4159601 ~ 4165471 (+) True ddx5
XM_039825060.1 mRNA upstream 7996 4159601 ~ 4164884 (+) False ddx5
XM_039824453.1 mRNA upstream 14543 4083329 ~ 4158337 (+) True smurf2
XM_039824454.1 mRNA upstream 14543 4083329 ~ 4158337 (+) False smurf2
XM_039824452.1 mRNA upstream 91236 4075854 ~ 4081644 (+) True kpna2
XM_039824374.1 mRNA downstream 132267 4324661 ~ 4328408 (+) True LOC120574172
XM_039824380.1 mRNA downstream 137678 4330072 ~ 4334194 (+) True LOC120574174
XM_039824376.1 mRNA downstream 145687 4338081 ~ 4342673 (+) False LOC120574173
XM_039824379.1 mRNA downstream 145688 4338082 ~ 4346405 (+) False LOC120574173
XM_039824378.1 mRNA downstream 147291 4339685 ~ 4342673 (+) True LOC120574173
TU205238 other upstream 509598 3658997 ~ 3663282 (+) True G151471
XR_005642001.1 other upstream 790267 3382514 ~ 3382613 (+) True LOC120575510
XR_005642000.1 other upstream 791494 3381287 ~ 3381386 (+) True LOC120575509
TU205031 other upstream 1024903 3146504 ~ 3147977 (+) True G151315
TU204936 other upstream 1169516 3001899 ~ 3003364 (+) True G151240
TU205526 other downstream 125779 4318173 ~ 4319498 (+) True G151695
XR_005641832.1 other downstream 145700 4338094 ~ 4346405 (+) False LOC120574173
TU205564 other downstream 207636 4400030 ~ 4403862 (+) True pde6hb
TU205565 other downstream 207636 4400030 ~ 4455745 (+) False pde6hb
TU205566 other downstream 207636 4400030 ~ 4469278 (+) False pde6hb

Expression Profile