RNA id: TU230657



Basic Information


Item Value
RNA id TU230657
length 252
lncRNA type inter_gene
GC content 0.52
exon number 2
gene id G170092
representative True

Chromosome Information


Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 30936906 ~ 30937273 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


agaagcagagtatgagggcgtgccctgacagtacctaggtaaggactacttgccagtcagaagcagagtatgagggtgtgccctgacagtacctaggtaaggactactagccagtcagaagcagagtatgagggtgtgccctgacagtacctaggtaaggactactagccagtcagaagcagagtatgagggcgtaccctgacagtacctaggtaaggactactagccagtcagaagcagagtatgagggcg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU230641 lncRNA downstream 22667 30913702 ~ 30914239 (-) True G170085
TU230633 lncRNA downstream 47331 30888006 ~ 30889575 (-) True G170078
TU230632 lncRNA downstream 47455 30888006 ~ 30889451 (-) False G170078
XR_005636409.1 lncRNA downstream 145030 30788469 ~ 30791876 (-) True LOC120543896
TU230604 lncRNA downstream 204824 30720942 ~ 30732082 (-) False LOC120575604
TU230687 lncRNA upstream 84631 31021904 ~ 31022240 (-) True G170106
TU230717 lncRNA upstream 170769 31108042 ~ 31110208 (-) True G170129
TU230731 lncRNA upstream 197618 31134891 ~ 31135385 (-) True G170138
TU230740 lncRNA upstream 203205 31140478 ~ 31140874 (-) True G170147
TU230747 lncRNA upstream 206669 31143942 ~ 31144588 (-) True G170154
XM_039778679.1 mRNA downstream 26542 30903631 ~ 30910364 (-) True serpinh1a
XM_039778152.1 mRNA downstream 35345 30890492 ~ 30901561 (-) True acer3
XM_039776748.1 mRNA downstream 61146 30859601 ~ 30875760 (-) True LOC120543607
XM_039777251.1 mRNA downstream 79686 30853556 ~ 30857220 (-) True LOC120543889
XM_039777258.1 mRNA downstream 85852 30846998 ~ 30851054 (-) True LOC120543892
XM_039777993.1 mRNA upstream 29358 30966631 ~ 30988577 (-) False samsn1b
XM_039777996.1 mRNA upstream 29358 30966631 ~ 30984938 (-) False samsn1b
XM_039777995.1 mRNA upstream 29358 30966631 ~ 30984938 (-) False samsn1b
XM_039777992.1 mRNA upstream 29358 30966631 ~ 30984938 (-) False samsn1b
XM_039777994.1 mRNA upstream 29358 30966631 ~ 30984938 (-) False samsn1b
TU230602 other downstream 85893 30849319 ~ 30851013 (-) False LOC120543892
TU230603 other downstream 106963 30829067 ~ 30829943 (-) False LOC120543890
TU230595 other downstream 197639 30738055 ~ 30739267 (-) False LOC120543890
TU230450 other downstream 522213 30411251 ~ 30414693 (-) False si:ch73-1a9.3
TU230433 other downstream 626319 30306849 ~ 30310587 (-) False LOC120543993
TU230664 other upstream 20228 30957501 ~ 30958498 (-) True G170098
TU231114 other upstream 1264436 32201709 ~ 32202206 (-) True G170463
TU231185 other upstream 1506013 32443286 ~ 32491305 (-) True LOC120543978
XR_005636561.1 other upstream 3342029 34279302 ~ 34279394 (-) True LOC120544758
XR_005636560.1 other upstream 3343652 34280925 ~ 34281017 (-) True LOC120544757

Expression Profile