RNA id: TU230687



Basic Information


Item Value
RNA id TU230687
length 337
lncRNA type inter_gene
GC content 0.41
exon number 1
gene id G170106
representative True

Chromosome Information


Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 31021904 ~ 31022240 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


gccccttaccctaaccttaaccatcacaactaaatgcctaaccttaacccttaccctaaccttaaccatcacaactaaatgcctaaccttaacccttaccctaaccttaaccatcacaactaaatgcctaaccttaacccttaccctcaccttaaccatcacaactaaatgcctaaccttaacccttaccctaaccttaaccatcacaactaaatgcctaaccttaacccttaccctaaccttaaccatcacaactaaatgcctaaccttaacccttaccctcaccctaaccataacctaattctatccctaatcctaaaaccaagtcttaaccctc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU230657 lncRNA downstream 84631 30936906 ~ 30937273 (-) True G170092
TU230641 lncRNA downstream 107665 30913702 ~ 30914239 (-) True G170085
TU230633 lncRNA downstream 132329 30888006 ~ 30889575 (-) True G170078
TU230632 lncRNA downstream 132453 30888006 ~ 30889451 (-) False G170078
XR_005636409.1 lncRNA downstream 230028 30788469 ~ 30791876 (-) True LOC120543896
TU230717 lncRNA upstream 85802 31108042 ~ 31110208 (-) True G170129
TU230731 lncRNA upstream 112651 31134891 ~ 31135385 (-) True G170138
TU230740 lncRNA upstream 118238 31140478 ~ 31140874 (-) True G170147
TU230747 lncRNA upstream 121702 31143942 ~ 31144588 (-) True G170154
TU230808 lncRNA upstream 268471 31290711 ~ 31291013 (-) True G170202
XM_039777993.1 mRNA downstream 33327 30966631 ~ 30988577 (-) False samsn1b
XM_039777996.1 mRNA downstream 36966 30966631 ~ 30984938 (-) False samsn1b
XM_039777995.1 mRNA downstream 36966 30966631 ~ 30984938 (-) False samsn1b
XM_039777992.1 mRNA downstream 36966 30966631 ~ 30984938 (-) False samsn1b
XM_039777994.1 mRNA downstream 36966 30966631 ~ 30984938 (-) False samsn1b
XM_039778054.1 mRNA upstream 221753 31243993 ~ 31265687 (-) False wscd1b
XM_039778052.1 mRNA upstream 221753 31243993 ~ 31265687 (-) True wscd1b
XM_039778053.1 mRNA upstream 221753 31243993 ~ 31265677 (-) False wscd1b
XM_039778405.1 mRNA upstream 313761 31336001 ~ 31337657 (-) True bhlha9
XM_039778403.1 mRNA upstream 335589 31357829 ~ 31370989 (-) True riox2
TU230664 other downstream 63406 30957501 ~ 30958498 (-) True G170098
TU230602 other downstream 170891 30849319 ~ 30851013 (-) False LOC120543892
TU230603 other downstream 191961 30829067 ~ 30829943 (-) False LOC120543890
TU230595 other downstream 282637 30738055 ~ 30739267 (-) False LOC120543890
TU230450 other downstream 607211 30411251 ~ 30414693 (-) False si:ch73-1a9.3
TU231114 other upstream 1179469 32201709 ~ 32202206 (-) True G170463
TU231185 other upstream 1421046 32443286 ~ 32491305 (-) True LOC120543978
XR_005636561.1 other upstream 3257062 34279302 ~ 34279394 (-) True LOC120544758
XR_005636560.1 other upstream 3258685 34280925 ~ 34281017 (-) True LOC120544757
TU231512 other upstream 3286754 34308994 ~ 34309714 (-) True G170802

Expression Profile