RNA id: TU244513


Basic Information

Item Value
RNA id TU244513
length 605
RNA type TUCP
GC content 0.56
exon number 4
gene id LOC120545105
representative True

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 36320335 ~ 36327396 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

TGCTGCCTGGCTGCGGTGCGGAAGGCTCGCGGACCAAAACAacttttcctcttcttcctcctcttgttcttctttttttcttcctcctctttctcctcctcgtGGACCATGGACGGGAATCAGAGTTTATTTCTCTCAGCTGCTCTGCGATCATGAGCACCTCGGACCTGTCCACAGTGGATGGCCCTGATAGGCTGTGTGTTTCTGAGCGCGCTCAGTGCGTCCCGTCTCAGGTCCTTCACCTGCGTCAGCTTCCTGTTGACGTCTCTGAACAGGAAGTGCTCGCTCTGGCCGTACCCTTCGGCCGGGTCACTAAGCTACTAACACTGAAGGCCAAGAACCAGGCGTTTGTTGAGATGGCGTCGGAGGAAGCGGCCGTTACCATGGTGAACTACTACACCGCGGCCCCGCCCACCGTCAGGAACCAGCCAATCTTCATCCAGTACTCCACCCACCGGGAACTCAAGACAGACAACCTGACCAATCAGGTGACGGGCCGCCCACTTctgcacatagacacacacagacacacacagacactcacacagacacacacacacagacacacagacacacacacagacacacacacacacacacacacc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU244517 lncRNA upstream 4364 36314333 ~ 36316003 (+) True G180437
TU244488 lncRNA upstream 8809 36231811 ~ 36311558 (+) True G180422
TU244493 lncRNA upstream 8809 36231811 ~ 36311558 (+) False G180422
TU244496 lncRNA upstream 8809 36231811 ~ 36311558 (+) False G180422
TU244492 lncRNA upstream 8809 36274942 ~ 36311558 (+) False G180422
TU244529 lncRNA downstream 127719 36451012 ~ 36451935 (+) True G180445
TU244537 lncRNA downstream 157430 36480723 ~ 36481049 (+) True G180452
TU244564 lncRNA downstream 246358 36569651 ~ 36573126 (+) True G180471
TU244569 lncRNA downstream 247352 36570645 ~ 36654034 (+) False G180474
TU244568 lncRNA downstream 330275 36653568 ~ 36654034 (+) True G180474
XM_039779493.1 mRNA upstream 54692 36223794 ~ 36265675 (+) False LOC120545287
XM_039779492.1 mRNA upstream 54692 36255950 ~ 36265675 (+) True LOC120545287
XM_039779494.1 mRNA upstream 54692 36257057 ~ 36265675 (+) False LOC120545287
XM_039779577.1 mRNA upstream 83455 36228300 ~ 36236912 (+) True LOC120545323
XM_039779546.1 mRNA upstream 259844 36048606 ~ 36060523 (+) True LOC120545305
XM_039779463.1 mRNA downstream 39709 36363002 ~ 36381752 (+) True LOC120545268
XM_039779462.1 mRNA downstream 39709 36363002 ~ 36381752 (+) False LOC120545268
XM_039779568.1 mRNA downstream 60720 36384013 ~ 36457532 (+) True capslb
XM_039779570.1 mRNA downstream 60720 36384013 ~ 36457532 (+) False capslb
XM_039779569.1 mRNA downstream 60720 36384013 ~ 36455928 (+) False capslb
TU244470 other upstream 142445 36176963 ~ 36177922 (+) True G180414
TU244471 other upstream 142445 36177340 ~ 36177922 (+) False G180414
TU244462 other upstream 143996 36123080 ~ 36176371 (+) True G180410
TU244460 other upstream 194982 36123080 ~ 36125385 (+) False G180410
TU244438 other upstream 261631 36058306 ~ 36058736 (+) False LOC120545305
TU244695 other downstream 780954 37104247 ~ 37109021 (+) False LOC120545327
XR_005636811.1 other downstream 939208 37262501 ~ 37262566 (+) True LOC120546136
XR_005636813.1 other downstream 940396 37263689 ~ 37263753 (+) True LOC120546138
XR_005636809.1 other downstream 941841 37265134 ~ 37265202 (+) True LOC120546134
XR_005636812.1 other downstream 942178 37265471 ~ 37265535 (+) True LOC120546137

Expression Profile