RNA id: TU256545


Basic Information

Item Value
RNA id TU256545
length 410
lncRNA type inter_gene
GC content 0.50
exon number 3
gene id G189327
representative True

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 33760348 ~ 33831603 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

gagagagagagacacacacacacacacacacacacagagagagagacacacacacacacacacacacagagagagagagacacacacacacacacacagagagagagacacacacacacacacacacacagagagagagagacacacacacacacacacacacacacacagagagagagacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagagagagacacacacacacacacacacacacacacacacacacacacacacacacacagagagagacacacacacacacacacaagagagagagagacacacacacacagagacacacacacacacacacacacagagacacacacacagagagacacacacacacacac

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU256514 lncRNA upstream 3581 33814904 ~ 33827371 (+) True G189299
TU256547 lncRNA upstream 57843 33772638 ~ 33773109 (+) True G189328
TU256527 lncRNA upstream 68736 33743508 ~ 33762216 (+) True G189311
TU256563 lncRNA downstream 8118 33839721 ~ 33884998 (+) True G189339
TU256566 lncRNA downstream 22075 33853678 ~ 33855469 (+) False LOC120546446
TU256568 lncRNA downstream 31602 33863205 ~ 33876447 (+) True G189344
TU256503 lncRNA downstream 54812 33886415 ~ 33943562 (+) False G189294
TU256504 lncRNA downstream 54812 33886415 ~ 33944584 (+) True G189294
XM_039781371.1 mRNA upstream 59550 33765353 ~ 33771402 (+) True LOC120546444
XM_039780949.1 mRNA upstream 164699 33629800 ~ 33666253 (+) True LOC120546181
XM_039780971.1 mRNA upstream 414866 33399801 ~ 33416086 (+) True LOC120546192
XM_039782541.1 mRNA upstream 443963 33328092 ~ 33386989 (+) False pex7
XM_039781373.1 mRNA downstream 14841 33846444 ~ 33856412 (+) True LOC120546446
XM_039781945.1 mRNA downstream 27549 33859152 ~ 34000536 (+) True LOC120546766
XM_039781947.1 mRNA downstream 176793 34008396 ~ 34013448 (+) False LOC120546767
XM_039781946.1 mRNA downstream 179337 34010940 ~ 34013448 (+) True LOC120546767
XM_039781374.1 mRNA downstream 187028 34018631 ~ 34035953 (+) True LOC120546447
TU256542 other upstream 59579 33765501 ~ 33771373 (+) False LOC120546444
XR_005637066.1 other upstream 67326 33763465 ~ 33763626 (+) True LOC120547364
TU256525 other upstream 145396 33641620 ~ 33685556 (+) True G189309
TU256470 other upstream 372184 33453996 ~ 33458768 (+) True G189269
TU256417 other upstream 499239 33328103 ~ 33331713 (+) False pex7
TU256516 other downstream 27543 33859146 ~ 33860403 (+) False LOC120546766
TU256522 other downstream 100461 33932064 ~ 33939387 (+) True G189307
TU256520 other downstream 133980 33965583 ~ 33986476 (+) True G189305
TU256875 other downstream 631305 34462908 ~ 34464897 (+) True G189544
TU256872 other downstream 651261 34482864 ~ 34503755 (+) True G189541

Expression Profile